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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:46:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Raja brachyura genome assembly, chromosome: 4.
OY740784.1:86041391-86041410
CGAGGCGGCGTCCGGACAGCAATGGCGGCC86041391AGATCTCCCACGATGCAGAGGGAGGGAGAAAGTGCCCGGCGCCGACCAGT
Sequence 1 from Patent WO9725346.
A93887.1:2-21
C2AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCGCCTCTCCCTCCCT
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a011H14_T7.
AM390264.1:60-79
CACTCGACGGAGTCTCCAACGCCTTCTCTC60AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a014L01_T7.
AM390942.1:60-79
CACTCGACGGAGTCTCCAACGCCTTCTCTC60AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
E0654 Chinese cabbage etiolated seedling library Brassica rapa subsp. pekinensis cDNA clone E0654, mRNA sequence.
BG543168.1:80-99
CACTCGACGGAGTCTCCAACGCCTTCTCTC80AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
BN25.071E21F020325 BN25 Brassica napus cDNA clone BN25071E21, mRNA sequence.
CD828608.1:80-99
CACTCGACGGAGTCTCCAACGCCTTCTCTC80AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
BN45.044D21F011228 BN45 Brassica napus cDNA clone BN45044D21, mRNA sequence.
CD835079.1:54-73
CACTCGATGGAGTCTCCAACGCCTTCTCTC54AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
24RDBNH_UP_010_F08_19DEC2003_054 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
CN730646.1:85-104
CACTCGACGGAGCCTCCAACGCCTTCTCTC85AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
50-E011255-021-008-D13-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022D138Q, mRNA sequence.
CX191750.1:34-53
CACTCGACGGAGTCTCCAACGCCTTCTCTC34AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
38RDBRM_UP_006_F11_31MAR2004_085 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX266079.1:125-144
CACTCGACGGAGTCTCCAACGCCTTCTCTC125AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
38RDBRM_UP_032_E03_13JUL2004_023 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX268243.1:218-237
CACTCGACGGAGTCTCCAGCGCCTTCTCTC218AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
38RDBRM_UP_035_D09_13JUL2004_073 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX268489.1:189-208
CACTCGACGGAGTCTCCAACGCCTTCTCTC189AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
38RDBRM_UP_050_C09_16JUL2004_075 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX269562.1:72-91
CACTCGACGGAGTCTCCAACGCCTTCTCTC72AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
Brassica oleracea var. viridis mRNA, clone: KALE-004G15, 5' end sequence.
DK457248.1:88-107
CACTCGACGGAGTCTCCAACGCCTTCTCTC88AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-005A24, 5' end sequence.
DK457495.1:85-104
CACTCGACGGAGTCTCCAACGCCTTCTCTC85AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-007B17, 5' end sequence.
DK458274.1:88-107
CACTCGACGGAGTCTCCAACGCCTTCTCTC88AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-009I08, 5' end sequence.
DK459194.1:73-92
CACTCGACGGAGTCTCCAACGCCTTCTCTC73AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-010C22, 5' end sequence.
DK459444.1:86-105
CACTCGACGGAGTCTCCAACGCCTTCTCTC86AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-016C07, 5' end sequence.
DK461725.1:62-81
CACTCGACGGAGTCTCCAACGCCTTCTCTC62AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-030M22, 5' end sequence.
DK467321.1:88-107
CACTCGACGGAGTCTCCAACGCCTTCTCTC88AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-035G03, 5' end sequence.
DK469073.1:75-94
CACTCGACGGAGTCTCCAACGCCTTCTCTC75AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-046C11, 5' end sequence.
DK473185.1:75-94
CACTCGACGGAGTCTCCAACGCCTTCTCTC75AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-047L11, 5' end sequence.
DK473785.1:73-92
CACTCGACGGAGTCTCCAACGCCTTCTCTC73AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-060H23, 5' end sequence.
DK478674.1:79-98
CACTCGACGGAGTCTCCAACGCCTTCTCTC79AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-067K01, 5' end sequence.
DK481398.1:73-92
CACTCGACGGAGTCTCCAACGCCTTCTCTC73AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-074J19, 5' end sequence.
DK484077.1:88-107
CACTCGACGGAGTCTCCAACGCCTTCTCTC88AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-085P15, 5' end sequence.
DK488425.1:75-94
CACTCGACGGAGTCTCCAACGCCTTCTCTC75AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-089K03, 5' end sequence.
DK489824.1:73-92
CACTCGACGGAGTCTCCAACGCCTTCTCTC73AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-090P22, 5' end sequence.
DK490347.1:75-94
CACTCGACGGAGTCTCCAACGCCTTCTCTC75AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-094J01, 5' end sequence.
DK491715.1:75-94
CACTCGACGGAGTCTCCAACGCCTTCTCTC75AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-102M02, 5' end sequence.
DK494851.1:75-94
CACTCGACGGAGTCTCCAACGCCTTCTCTC75AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-126G19, 5' end sequence.
DK503897.1:86-105
CACTCGACGGAGTCTCCAACGCCTTCTCTC86AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-131J19, 5' end sequence.
DK505883.1:83-102
CACTCGACGGAGTCTCCAACGCCTTCTCTC83AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-135I12, 5' end sequence.
DK507382.1:75-94
CACTCGACGGAGTCTCCAACGCCTTCTCTC75AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-136A22, 5' end sequence.
DK507582.1:83-102
CACTCGACGGAGTCTCCAACGCCTTCTCTC83AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-139E05, 5' end sequence.
DK508807.1:79-98
CACTCGACGGAGTCTCCAACGCCTTCTCTC79AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-154C17, 5' end sequence.
DK514496.1:88-107
CACTCGACGGAGTCTCCAACGCCTTCTCTC88AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. viridis mRNA, clone: KALE-155C05, 5' end sequence.
DK514868.1:88-107
CACTCGACGGAGTCTCCAACGCCTTCTCTC88AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
54ACDHPE_UP_026_F07_11NOV2004_053 Brassica napus DH12075 PEG Brassica napus cDNA 5', mRNA sequence.
DY003391.1:213-232
CACTCGACGGAGTCTCCAACGCCTTCTCTC213AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
63JKCOT5_T3_020_C12_22JAN2005_092 63JKCOT5 Brassica napus cDNA 5', mRNA sequence.
DY021591.1:64-83
CACTCGACGGAGTCTCCAACGCCTTCTCTC64AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
55ACACPE_UP_024_F05_17DEC2004_037 Brassica napus AC Excell Brassica napus cDNA 5', mRNA sequence.
EE411713.1:219-238
CACTCGACGGAGTCTCCAACGCCTTCTCTC219AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
60ACAB48_UP_010_A08_30SEP2004_064 Brassica napus seed library Brassica napus cDNA 5', mRNA sequence.
EE422944.1:72-91
CACTCGACGGAGTCTCCAACGCCTTCTCTC72AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
35ETGS60_UP_015_H10_12FEB2005_066 Brassica napus 35ETGS60 Brassica napus cDNA 5', mRNA sequence.
EE432482.1:222-241
CACTCGACGGAGTCTCCAACGCCTTCTCTC222AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
72ETGS24_UP_017_C09_20MAY2005_075 72ETGS24 Brassica napus cDNA 5', mRNA sequence.
EE444266.1:249-268
CACTCGACGGAGTCTCCAACGCCTTCTCTC249AGATCTCCCACGATGCAGAGCTCCGCCGTCTTTCTCCCTCTCTCCCTCGC
72ETGS24_UP_020_B06_20MAY2005_046 72ETGS24 Brassica napus cDNA 5', mRNA sequence.
EE444504.1:76-95
CACTCGACGGAGTCTCCAACGCCTTCTCTC76AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
BNBS2DCT_UP_011_A11_11MAR2005_095 Brassica napus seeds BNBS2DCT Brassica napus cDNA 5', mRNA sequence.
EE451780.1:127-146
CACTCGACGGAGTCTCCAACACCTTCTCTC127AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
36RDBRG_UP_036_C03_24JUN2004_027 Brassica rapa 36RDBRG Brassica rapa cDNA 5', mRNA sequence.
EE519113.1:72-91
CACTCGACGGAGTCTCCAACGCCTTCTCTC72AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
38RDBRM_UP_062_C11_07DEC2005_091 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
EE528222.1:72-91
CACTCGACGGAGTCTCCAACGCCTTCTCTC72AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
38RDBRM_UP_064_E06_07DEC2005_040 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
EE528351.1:193-212
CACTCGACGGAGTCTCCAACGCCTTCTCTC193AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
39RDBRT_UP_060_D09_30NOV2005_073 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
EE529452.1:86-105
CACTCGACGGAGTCTCCAACGCCTTCTCTC86AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
OL4388R Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL4388, mRNA sequence.
EH420307.1:42-61
CACTCGACGGAGTCTCCAACGCCTTCTCTC42AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
BNARO4GH_T3_022_G12_24NOV2006_084 Brassica napus BNARO4GH Brassica napus cDNA 5', mRNA sequence.
ES904782.1:108-127
CACTCGACGGAGTCTCCAACGCCTTCTCTC108AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_1795.
FX699115.1:230-249
CACTCGACGGAGTCTCCAACGCCTTCTCTC230AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_2865.
FX740667.1:230-249
CACTCGACGGAGTCTCCAACGCCTTCTCTC230AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
TSA: Raphanus sativus RS02352 mRNA sequence.
JT786899.1:8-27
CTCACTC8AGATCTCCCACGATGCAGAGCTCCGCCTCCCCACTCTTCTCTTCTTTTGA
Sorghum bicolor cultivar Hongyingzi chromosome 4.
CP137828.1:12272783-12272802
ATGGTTTAGATTCATCCTTTAGGTCGGTGG12272783AGATCTCCCACGATGCAGAGTCCTGATTGGCCTCAAGAGGTGGGCGGGCG
Sorghum bicolor cultivar Huandiaonuo chromosome 4.
CP137838.1:12250765-12250784
ATGGTTTAGATTCATCCTTTAGGTCGGTGG12250765AGATCTCCCACGATGCAGAGTCCTGATTGGCCTCAAGAGGTGGGCGGGCG
Brassica napus plastid phosphoenolpyruvate/phosphate translocator mRNA, complete cds; nuclear gene for plastid product.
DQ985809.1:1-20
1AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
Brassica napus plastid phosphoenolpyruvate/phosphate translocator (PPT1) gene, complete cds; nuclear gene for plastid product.
EU665688.1:1-20
1AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
Brassica napus genome assembly, chromosome: A08.
HG994362.1:11889103-11889122
CACTCGACGGAGTCTCCAACGCCTTCTCTC11889103AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
Brassica rapa genome, scaffold: A08.
LR031575.1:10893974-10893993
CACTCGACGGAGTCTCCAACGCCTTCTCTC10893974AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:17750157-17750176
CACTCGACGGAGTCTCCAACGCCTTCTCTC17750157AGATCTCCCACGATGCAGAGCTCCGCCGTGTTCTCCCTCTCTCCCTCGCT
Raphanus sativus genome assembly, chromosome: 9.
LR778318.1:13649707-13649726
GAACTCACGCCTTCCCCAAACATCTCACTC13649707AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCCCT
Brassica rapa genome assembly, chromosome: A08.
LS974624.2:16702570-16702589
CACTCGACGGAGTCTCCAACGCCTTCTCTC16702570AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCCTCTCTCCCTCGCT
Brassica oleracea var. botrytis non-green plastid phosphate/triose-phosphate translocator TPT precursor (BONGTPT) mRNA, complete cds.
U13632.1:2-21
C2AGATCTCCCACGATGCAGAGCTCCGCCGTCTTCTCCGCCTCTCCCTCCCT
Dioctria rufipes genome assembly, chromosome: 2.
OZ002741.1:87175032-87175051
TCAGGAAAACTTTACTTACACTCGTCGAAT87175032AGATCTCCCACGATGCAGAGGAATCTTCCAATTTTCCGTCATCTAAAATT
Dioctria rufipes genome assembly, chromosome: 2.
OZ002741.1:89047265-89047284
TCAGGAAAACTTTACTTACACTCGTCGAAT89047265AGATCTCCCACGATGCAGAGGAATCTTCCAATTTTCCGTCATCTAAAATT
Dioctria rufipes genome assembly, chromosome: 2.
OZ002741.1:92796133-92796152
TCAGGAAAACTTTACTTACACTCGTCGAAT92796133AGATCTCCCACGATGCAGAGGAATTTTCCAATTTTCCGTCATCTAAAATT
Dioctria rufipes genome assembly, chromosome: 2.
OZ002741.1:95641189-95641208
TCATGAAAACTTTACTTACACTCGTCGAAT95641189AGATCTCCCACGATGCAGAGGAATCTTCCAATTTTCCGTCATCTAAAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGATCTCCCACGATGCAGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGATCTCCCACGATGCAGAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
4.376 | 4.368 | search_plus_done; http://172.18.8.135:50400/match?q=AGATCTCCCACGATGCAGAG&k=0&no_gap=0&offset=0&limit=50
4.517 | 0.141 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTGCATCGTGGGAGATCT&k=0&no_gap=0&offset=0&limit=0
4.517 | 0.000 | cgi_end;

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