GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-26 13:27:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Heterocephalus glaber genome assembly, chromosome: 4.
OX090912.1:48291981-48292000
ACACTCAGAAAATCTGCTGTGCTTTTCCCC48291981AGATGAGCAACCCATGAAGGCACCTGGGCCACACCAAGCAGAGAGGTTTG
Heterocephalus glaber genome assembly, chromosome: 4.
OX090912.1:48376717-48376736
ACACTCAGAAAATCTGCTGTGCTCTTCCCC48376717AGATGAGCAACCCATGAAGGCACCTGGGCCACACCAAGCAGAGAGGTTTG
Vigna angularis mRNA, clone: VES06D07.
HX944420.1:324-343
TGGTACTCAGTATGACAGTGTTATCGAAGA324AGATGAGCAACCCATGAAGGCTAGTTGCGATGACGAAGAAGAAGAAGAAG
Vigna angularis mRNA, clone: VES07M24.
HX945031.1:324-343
TGGTACTCAGTATGACAGTGTTATCGAAGA324AGATGAGCAACCCATGAAGGCTAGTTGCGATGACGAAGAAGAAGAAGAAG
Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
AP015039.1:37592797-37592816
TGGTACTCAGTATGACAGTGTTATCGAAGA37592797AGATGAGCAACCCATGAAGGCTAGTTGCGATGACGAAGAAGAAGAAGAAG
Ipomoea trifida cultivar NCNSP0306 chromosome 1.
CP025644.1:11320309-11320328
CTTTCCCTCCAAAATGAGGGGAAATTTTGC11320309CCTTCATGGGTTGCTCATCTTTCACCCTCAATCCATGCATCAGACCTATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGATGAGCAACCCATGAAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGATGAGCAACCCATGAAGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.255 | 0.246 | search_plus_done; http://172.18.8.135:50400/match?q=AGATGAGCAACCCATGAAGG&k=0&no_gap=0&offset=0&limit=50
0.275 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCATGGGTTGCTCATCT&k=0&no_gap=0&offset=0&limit=45
0.275 | 0.001 | cgi_end;

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