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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 17:29:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 7.
CP124713.1:117826095-117826114
TGTCATTCAAGAAACATCACCAACACGTAT117826095AGATGCAAGATGCTAAAAGCTGCTAGCAGAAGTCATGGAAACATGTGATA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 7.
CP124713.1:117833375-117833394
TGTCATTCAAGAAACATCACTAGCACGTAT117833375AGATGCAAGATGCTAAAAGCTGCTAGCGGAAGTCATGGAAACATGTGATA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 7.
CP124713.1:117839543-117839562
TGTCATTCAAGAAACATCACCAGACTGTAT117839543AGATGCAAGATGCTAAAAGCTGCTAGCGAAAGTCATGGAAACATGTGATA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 6.
CP124714.1:93800017-93800036
TGTCATTCAAGAAATATCACCAGCACATAT93800017AGATGCAAGATGCTAAAAGCTGCTAGCGGATGTTATGGACACATTTGATA
Logfia minima genome assembly, chromosome: 6.
OY992768.1:34549216-34549235
CGGAAGAATGAACAAAGTTAGCATGTCTAT34549216AGATGCAAGATGCTAAAAGCATGAAATTAGACCCACATAATTTGAACAGG
Diarsia rubi genome assembly, chromosome: 5.
OW026416.1:7556802-7556821
ACCCAACATGATGATGATGATGAAAGATGA7556802AGATGCAAGATGCTAAAAGCTTTTTTTGCTATTTTGTCTTTTACTTCTTT
Logfia minima genome assembly, chromosome: 7.
OY992769.1:33322272-33322291
AATCAGCAAATCATTTGGGTTTAATTTCAT33322272GCTTTTAGCATCTTGCATCTATAGACCAGCTAAGTTTGTTCAGTCTTCCA
Pyrgus malvae genome assembly, chromosome: Z.
OU426947.1:15102318-15102337
ACTTAAACGTATTTTTGGCATTTCACGCGC15102318GCTTTTAGCATCTTGCATCTGTCTGTCTATTTTAGCAGTTTGGCATCTGT
Hypsopygia costalis genome assembly, chromosome: 8.
OW443333.2:22758499-22758518
AGCTACTTTCCAGCTGTGGTGTGTGTGTGT22758499GCTTTTAGCATCTTGCATCTGAACTTAGACAGACTCACAACTCAGTGCAT
Hypsopygia costalis genome assembly, chromosome: 8.
OW443333.2:22788481-22788500
AGCTACTTTCCAGCTGTGGTGTGTGTGTGT22788481GCTTTTAGCATCTTGCATCTGAACTTAGACAGACTCACAACTCAGTGCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGATGCAAGATGCTAAAAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGATGCAAGATGCTAAAAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.350 | 0.341 | search_plus_done; http://172.18.8.135:50400/match?q=AGATGCAAGATGCTAAAAGC&k=0&no_gap=0&offset=0&limit=50
0.492 | 0.142 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTTTAGCATCTTGCATCT&k=0&no_gap=0&offset=0&limit=44
0.494 | 0.003 | cgi_end;

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