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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-15 17:37:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Scyliorhinus canicula genome assembly, chromosome: 5.
LR744034.1:43825049-43825068
TTGAGACAGAGCTGAGAATTATTTTCTCTC43825049AGATGCTCATGAGTCAATGGAACTCTTCCTTAAATGGCAGTGGAAGCAGA
LJNAV90TF JCVI-LJ3 Lotus japonicus cDNA 5', mRNA sequence.
GO034909.1:272-291
TTTAGAAGGGAACTAATATCTGGTATATGA272AGATGCTCATGAGTCAATGGATCAATACTCCAAGGAACTGTGACAAATGG
Lotus japonicus genomic DNA, chromosome 1, clone: LjT13M13, TM0051b.
AP004901.1:32259-32278
TTTAGAAGGGAACTAATATCTGGTATATGA32259AGATGCTCATGAGTCAATGGATCAATACTCCAAGGAACTGTGACAAATGG
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-04.
CP023116.1:25378138-25378157
TGCTTTAGAAGGGAAATATCTTGTTTGTGA25378138AGATGCTCATGAGTCAATGGATCAACAATCCAAGGAGCTTGATCAGATCC
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-08.
CP023120.1:5693801-5693820
TGCTTTAGAAGGGAATTATCTTGTTTGTGA5693801AGATGCTCATGAGTCAATGGATCGACACTCCAAGGAGCTTGATGAGATCC
LJNAV90TO JCVI-LJ3 Lotus japonicus cDNA 3', mRNA sequence.
GO040002.1:386-405
CCATTTGTCACAGTTCCTTGGAGTATTGAT386CCATTGACTCATGAGCATCTTCATATACCAGATATTAGTTCCCTTCTAAA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT40C04, TM0199.
AP006116.1:95940-95959
CCATTTGTCACAGTTCCTTGGAGTATTGAT95940CCATTGACTCATGAGCATCTTCATATACCAGATATTAGTTCCCTTCTAAA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:101384307-101384326
CCATTTGTCACAGTTCCTTGGAGTATTGAT101384307CCATTGACTCATGAGCATCTTCATATACCAGATATTAGTTCCCTTCTAAA
Aplysina aerophoba genome assembly, chromosome: 2.
OX465034.1:7826499-7826518
TTAACACTAAGGCAACACCTTCTCCTTTAA7826499CCATTGACTCATGAGCATCTGGAGTTTTCCTCCCTGCTGTTAGCACCATA
Nicrophorus investigator genome assembly, chromosome: 3.
OY735142.1:10207874-10207893
GTATATCAGTTATTGAACTGCTATCTTTTC10207874CCATTGACTCATGAGCATCTTCTGATAAGTAAGGTAAATAGTATGAACAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGATGCTCATGAGTCAATGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGATGCTCATGAGTCAATGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.214 | 0.205 | search_plus_done; http://172.18.8.135:50400/match?q=AGATGCTCATGAGTCAATGG&k=0&no_gap=0&offset=0&limit=50
0.329 | 0.115 | search_minus_done; http://172.18.8.135:50400/match?q=CCATTGACTCATGAGCATCT&k=0&no_gap=0&offset=0&limit=45
0.332 | 0.003 | cgi_end;

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