GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:37:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS24002H04 KS24 Capsicum annuum cDNA, mRNA sequence.
GD118154.1:409-428
TTGTCTAATCCTCTTTGCATTCGCGAATTC409CATCTCCGCGTATTCCATCTCCCTCTTCGCGTGTCTTCTTGCTTCCTCTG
KS25018I20 KS25 Capsicum annuum cDNA, mRNA sequence.
GD125480.1:440-459
TTGTCTAATCCTCTTTGCATTCGCGAATTC440CATCTCCGCGTATTCCATCTCCCTCTTCGCGTGTCTTCTTGCTTCCTCTG
TSA: Capsicum annuum MGMT_Contig1489, mRNA sequence.
JW051733.1:367-386
TTGTCTAATCCTCTTTGCATTCGCGAATTC367CATCTCCGCGTATTCCATCTCCCTCTTCGCGTGTCTTCTTGCTTCCTCTG
TSA: Capsicum annuum EJ_MegaContig_43024, mRNA sequence.
JW138158.1:357-376
TTGTCTAATCCTCTTTGCATTCGCGAATTC357CATCTCCGCGTATTCCATCTCCCTCTTCGCGTGTCTTCTTGCTTCCTCTG
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:2935821-2935840
TTGTCTAATCCTCTTTGCATTCGCGAATTC2935821CATCTCCGCGTATTCCATCTCCCTCTTCGCGTGTCTTCTTGCTTCCTCTG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:16194491-16194510
TTGTCTAATCCTCTTTGCATTCGCGAATTC16194491CATCTCCGCGTATTCCATCTCCCTCTTCGCGTGTCTTCTTGCTTCCTCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGATGGAATACGCGGAGATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGATGGAATACGCGGAGATG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=AGATGGAATACGCGGAGATG&k=0&no_gap=0&offset=0&limit=50
0.312 | 0.218 | search_minus_done; http://172.18.8.135:50400/match?q=CATCTCCGCGTATTCCATCT&k=0&no_gap=0&offset=0&limit=50
0.317 | 0.004 | cgi_end;

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