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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 04:15:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH049_00296m, 5' end sequence.
AB450724.1:377-399
CAGCAGTTACAAGCCATGCTTCACCAGCAG377AGATTACGGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTGCAGAGAGC
Pyrus pyrifolia mRNA, clone: NLE2_02_69, 5' end sequence, expressed in leaf.
HX766924.1:377-399
CAGCAGTTACAAGCCATGCTTCACCAGCAG377AGATTACGGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTGCAGAGAGC
Pyrus pyrifolia mRNA, clone: NLE2_02_96, 5' end sequence, expressed in leaf.
HX766949.1:377-399
CAGCAGTTACAAGCCATGCTTCACCAGCAG377AGATTACGGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTGCAGAGAGC
TSA: Pyrus pyrifolia mRNA, contig: contig_3841.
FX396517.1:377-399
CAGCAGTTACAAGCCATGCTTCACCAGCAG377AGATTACGGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTGCAGAGAGC
TSA: Cannabis sativa PK29628.1_1.CasaPuKu mRNA sequence.
JP467914.1:845-867
CCACAGTTACAAGCTTTGCTTCAGCAGCAG845AGATTACGGCAACAGCAACAGATGTTGCAGTCTATGCCACAGTTGCAGAGAGC
TSA: Pyrus x bretschneideri Unigene12182_XinShao mRNA sequence.
JR607186.1:969-991
CCCCAGTTACAAGCCTTGCTTCAGCAGCAG969AGATTACGGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTGCAGAGGGC
TSA: Pyrus x bretschneideri Unigene84546_XinShao mRNA sequence.
JR668691.1:88-110
CAGCAGTTACAAGCCATGCTTCACCAGCAG88AGATTACGGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTGCAGAGAGC
TSA: Pyrus x bretschneideri Unigene84547_XinShao mRNA sequence.
JR668692.1:1141-1163
CCCCAGTTACAAGCCTTGCTTCAGCAGCAG1141AGATTACGGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTGCAGAGGGC
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:30937915-30937937
GCCCAGTTACAAGCCATGCTTCAGCAGCAG30937915AGATTACGGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTGCAGAGAGC
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141964.1:823844-823866
CCCCAGTTACAAGCCATGCTTCAGCAGCAG823844AGATTACGGCAACAGCAACAGATTTTACAGTCAATGCGTCAACTGCAGAGAGC
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:33586088-33586110
TCCTCATCTTCGGAGGATGAGGAGCAGCAG33586088AGATTACGGCAACAGCAACAGATTTTACAGTCAATGCCTCAACTGCAGAGAGC
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:3344404-3344426
CCCCAGTTACAAGCCATGTTTCAGCAGCAG3344404AGATTACGGCAACAGCAACAGATTTTGCAATCAATGCCTCAACTCCAGAGGGC
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:2632413-2632435
CCCCAGTTACAAGCCATGCTTCAGCAGCAG2632413AGATTACGGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTGCAGAGGGC
Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:35144670-35144692
GCTCTCTGCAGTTGAGGCATTGACTGCAAA35144670ATCTGTTGCTGTTGCCGTAATCTCTGCTGCTGAATCATGGCTTGAAACTGGGG
Pyrus communis genome assembly, chromosome: 5.
OY757072.1:27205780-27205802
GCTCTCTGCAGTTGAGGCATTGACTGTAAA27205780ATCTGTTGCTGTTGCCGTAATCTCTGCTGGTGAAGCATGGCTTGTAACTGCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGATTACGGCAACAGCAACAGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGATTACGGCAACAGCAACAGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.660 | 0.652 | search_plus_done; http://172.18.8.135:50400/match?q=AGATTACGGCAACAGCAACAGAT&k=0&no_gap=0&offset=0&limit=50
0.789 | 0.129 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTGTTGCTGTTGCCGTAATCT&k=0&no_gap=0&offset=0&limit=37
0.791 | 0.001 | cgi_end;

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