GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:31:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

HTAO-aaa81d07.b1 Heterorhabditis_bacteriophora_EST_L3+L4_pSMART Heterorhabditis bacteriophora cDNA similar to gb|AAF08341.1|AF064240_1 peptidyl-prolyl cis-trans isomerase [Brugia malayi], mRNA sequenc
FG975496.1:30-49
ATGAACCATATATTTATCAAAATCTGTAT30AGCAAACACCCTTTTTGTGGATTACCAACGACAACATGGCAAACCAGATA
KS13036H03 KS13 Capsicum annuum cDNA, mRNA sequence.
GD054945.1:264-283
TTCTTTCCCTTTTTTGAGCATATCTGAGAT264AGCAAACACCCTTTTTGTGGATAGTTTTGGAGCTTCATTCATGCAAAGAT
KS20005C10 KS20 Capsicum annuum cDNA, mRNA sequence.
GD093760.1:192-211
TTCTTTCCCTTTTTTGAGCATATCTGAGAT192AGCAAACACCCTTTTTGTGGATAGTTTTGGAGCTTCATTCATGCAAAGAT
TSA: Capsicum annuum MACs80_10827, mRNA sequence.
JW171918.1:326-345
TTCTTTCCCTTTTTTGAGCATATCTGAGAT326AGCAAACACCCTTTTTGTGGATAGTTTTGGAGCTTCATTCATGCAAAGAT
Ecliptopera silaceata genome assembly, chromosome: 1.
OW052191.1:11977762-11977781
GTACGCCTTAAAAAGAAGCCAGAACAGGTA11977762AGCAAACACCCTTTTTGTGGTTCAATCGGACTGAATTCCATTCCATTGGG
TSA: Capsicum annuum MGMT_Contig40773 mRNA sequence.
JW091017.1:1716-1735
ATCTTTGCATGAATGAAGCTCCAAAACTAT1716CCACAAAAAGGGTGTTTGCTATCTCAGATATGCTCAAAAAAGGGAAAGAA
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:157191243-157191262
ATCTTTGCATGAATGAAGCTCCAAAACTAT157191243CCACAAAAAGGGTGTTTGCTATCTCAGATATGCTCAAAAAAGGGAAAGAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:170002010-170002029
ATCTTTGCATGAATGAAGCTCCAAAACTAT170002010CCACAAAAAGGGTGTTTGCTATCTCAGATATGCTCAAAAAAGGGAAAGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCAAACACCCTTTTTGTGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCAAACACCCTTTTTGTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.367 | 0.358 | search_plus_done; http://172.18.8.135:50400/match?q=AGCAAACACCCTTTTTGTGG&k=0&no_gap=0&offset=0&limit=50
0.425 | 0.058 | search_minus_done; http://172.18.8.135:50400/match?q=CCACAAAAAGGGTGTTTGCT&k=0&no_gap=0&offset=0&limit=45
0.427 | 0.002 | cgi_end;

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