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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 15:28:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium repens mRNA, clone: WCC05n12_088, unspecified EST.
FY456006.1:62-81
CTGCTGTACCTCCACCTCCTACACAACAAC62AGCAACAACGACTGATGTGGCCCCCGTGCAGCAGCAGCAGCAGCAGCAGC
Trifolium repens mRNA, clone: WCC39e06_083, unspecified EST.
FY467833.1:58-77
TGCTACTGCTGTACCTCCACCTCCTACAAC58AGCAACAACGACTGATGTGGACCCCGTGCCCCTGCAGCAGCAGCAGCAGC
Trifolium repens mRNA, clone: WCC42d08_026, unspecified EST.
FY468886.1:601-620
TGCTACTGCTGTACCTCCACCTCCTACAAC601AGCAACAACGACTGATGTGGCCCCCGTGCAGCAGCAGCAGCAGCAGCAGC
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:59499282-59499301
TGCTGTACCTCCACCTCCTACAACAACAAC59499282AGCAACAACGACTGATGTGGCCCCCGTGCAGCAGCAGCAGCAGCCTCCTG
Aegilops umbellulata cultivar TA1851 chromosome 7U.
CP136060.1:467999037-467999056
TTCTAACCACCTGTTTGAAGGAATAAATAA467999037AGCAACAACGACTGATGTGGGGGAAGGCACACATAGTTTTTTCTGGAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGCAACAACGACTGATGTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCAACAACGACTGATGTGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.371 | 0.362 | search_plus_done; http://172.18.8.135:50400/match?q=AGCAACAACGACTGATGTGG&k=0&no_gap=0&offset=0&limit=50
0.397 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=CCACATCAGTCGTTGTTGCT&k=0&no_gap=0&offset=0&limit=45
0.397 | 0.000 | cgi_end;

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