GGGenome | Results

データベース：

ミスマッチ/ギャップを許容ミスマッチのみ許容：塩基まで (検索する配列長の25%まで)
双方向を検索＋方向のみ検索－方向のみ検索

2026-03-05 00:33:12, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BOHET76TF BOHE Brassica oleracea genomic clone BOHET76, genomic survey sequence.
BH433445.1:161-180

ACCAACGATGTCTCCTTGAGGGCTAACAAG161AGCAACATTCTTGGACACACCGATCTGTTCTTTGGTCTGATCATCAATAG

Brassica napus cultivar Xiang5A chromosome 18.
CP151913.1:34170623-34170642

ACCAACGATGTCTCCTTGAGGGCTAACAAG34170623AGCAACATTCTTGGACACACCGATCTGTTCTTTGGTCTGATCATCGATAG

Brassica napus genome assembly, chromosome: C08.
HG994372.1:21208387-21208406

ACCAACGATGTCTCCTTGAGGGCTAACAAG21208387AGCAACATTCTTGGACACACCGATCTGTTCTTTGGTCTGATCATCGATAG

Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:30356110-30356129

ACCAACGATGTCTCCTTGAGGGCTAACAAG30356110AGCAACATTCTTGGACACACCGATCTGTTCTTTGGTCTGATCATCGATAG

Brassica nigra genome assembly, chromosome: 4.
OZ173174.1:18309336-18309355

ACCGATGATATCTCCTTGAGGGGTAACAAG18309336AGCAACATTCTTGGACACACCGATCTGTTCTTTGGTCTGATCATCAATAG

Brassica nigra genome assembly, chromosome: 5.
OZ173175.1:3336065-3336084

ACCGATGATGTCTCCTTGAGGGCTAACAAG3336065AGCAACATTCTTGGACACACCGATCTGTTCTTTGGTCTGATCATCAATAG

Brassica oleracea genome assembly, chromosome: 8.
OZ281591.1:31820092-31820111

ACCAACGATGTCTCCTTGAGGGCTAACAAG31820092AGCAACATTCTTGGACACACCGATCTGTTCTTTGGTCTGATCATCGATAG

Brassica oleracea genome assembly, chromosome: 8.
OZ281601.1:39060489-39060508

ACCAACGATGTCTCCTTGAGGGCTAACAAG39060489AGCAACATTCTTGGACACACCGATCTGTTCTTTGGTCTGATCATCGATAG

Brassica oleracea var. botrytis genome assembly, chromosome: 8.
OZ282433.1:32608465-32608484

ACCAACGATGTCTCCTTGAGGGCTAACAAG32608465AGCAACATTCTTGGACACACCGATCTGTTCTTTGGTCTGATCATCGATAG

Magelona johnstoni genome assembly, chromosome: 3.
OZ012686.1:19493372-19493391

CTCTGCACCAGATGAACACATTTTCATCAC19493372AGCAACATTCTTGGACACACATTATCTTGGACACCATTTATTCATATGAG

Euxoa temera genome assembly, chromosome: 8.
OZ259696.1:11479953-11479972

ACAAAGAATGATGAATTAATTAATAATAAA11479953AGCAACATTCTTGGACACACATCCCAAATTAGTATGATTTAAAAGTATAT

Sequence 4159 from Patent EP2519097.
JB351747.1:620-639

CTATCGATGATCAGACCAAAGAACAGATCG620GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Sequence 4162 from Patent EP2519097.
JB351750.1:613-632

CTATNGATGATCAGACCAAAGAACAGATCG613GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Sequence 4159 from patent US 9493785.
KH363658.1:620-639

CTATCGATGATCAGACCAAAGAACAGATCG620GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Sequence 4162 from patent US 9493785.
KH363661.1:613-632

CTATNGATGATCAGACCAAAGAACAGATCG613GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Sequence 4159 from Patent EP3056569.
LQ607308.1:620-639

CTATCGATGATCAGACCAAAGAACAGATCG620GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Sequence 4162 from Patent EP3056569.
LQ607311.1:613-632

CTATNGATGATCAGACCAAAGAACAGATCG613GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Sequence 4159 from patent US 10351873.
MO208880.1:620-639

CTATCGATGATCAGACCAAAGAACAGATCG620GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Sequence 4162 from patent US 10351873.
MO208883.1:613-632

CTATNGATGATCAGACCAAAGAACAGATCG613GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Brassica oleracea var. viridis mRNA, clone: KALE-017H23, 5' end sequence.
DK462239.1:543-562

CTATCGATGATCAGACCAAAGAACAGATCG543GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

63JKCOT5_T3_028_F01_25JAN2005_005 63JKCOT5 Brassica napus cDNA 5', mRNA sequence.
DY022321.1:620-639

CTATCGATGATCAGACCAAAGAACAGATCG620GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

BNARO6GH_T3_020_A03_07DEC2006_031 Brassica napus BNARO6GH Brassica napus cDNA 5', mRNA sequence.
ES910527.1:599-618

CTATCGATGATCAGACCAAAGAACAGATCG599GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

BOGYD77TF BOGY Brassica oleracea genomic clone BOGYD77, genomic survey sequence.
BH422984.1:122-141

CTATTGATGATCAGACCAAAGAACAGATCG122GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Brassica oleracea var. botrytis ATP sulfurylase precursor (ASB1) mRNA, complete cds; nuclear gene for chloroplast product.
AF195511.1:539-558

CTATCGATGATCAGACCAAAGAACAGATCG539GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:20545901-20545920

CTATCGATGATCAGACCAAAGAACAGATCG20545901GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Flueggea virosa isolate bfs chromosome A13.
CP140332.1:1317557-1317576

ATAAGATTTTCACAACAGCACATCCACACA1317557GTGTGTCCAAGAATGTTGCTAATTGATGTTACATTTTTCTGCTTTGGTTT

Flueggea virosa isolate bfs chromosome B13.
CP140334.1:1321891-1321910

ATAAGATTTTCACAACAGCACATCCACACA1321891GTGTGTCCAAGAATGTTGCTAATTGATGTTACATTTTTCTGCTTTGGTTT

Sambucus nigra genome assembly, chromosome: 7.
OX422213.1:200968184-200968203

ACATCATAATTTAGCTTGGAAGCAAGCTAC200968184GTGTGTCCAAGAATGTTGCTATCGAAAAGCCTGTCTTGTGGCTTGCCCAC

Brassica rapa subsp. trilocularis genome assembly, chromosome: 8.
OZ282422.1:32507740-32507759

CGATCGATGACCAGACCAAAGAACAGATCG32507740GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTCGGT

Brassica oleracea ATP-sulfurylase precursor (ASBo) gene, complete cds.
U69694.1:1148-1167

CTATTGATGATCAGACCAAAGAACAGATCG1148GTGTGTCCAAGAATGTTGCTCTTGTTAGCCCTCAAGGAGACATCGTTGGT

Eratigena atrica genome assembly, chromosome: 2.
OZ222581.1:75153228-75153247

TCCTATACTTTTGGGTATGGAGCCGTTCAG75153228GTGTGTCCAAGAATGTTGCTTCTTCGAATTCCAATTTCAATTATCTAAAA

Euxoa segnilis genome assembly, chromosome: 10.
OZ255550.1:17099985-17100004

TTAAACTTGTAAATCGTACTAATTTGGGAT17099985GTGTGTCCAAGAATGTTGCTTTTATTATTAATTAATTCATCATTCTTTGT

Euxoa segnilis genome assembly, chromosome: 10.
OZ255583.1:16584384-16584403

TTAAACTTGTAAATCATACTAATTTGGGAT16584384GTGTGTCCAAGAATGTTGCTTTTATTATTAATTAATTCATCATTCTTTGT

Gasterosteus aculeatus genome assembly, chromosome: 12.
OZ193837.1:6627025-6627044

AGATCATTGAAAGATGTGAGTAAGTGTAGC6627025GTGTGTCCAAGAATGTTGCTAAAATTGCCACCTGATTTCAGACAGCGATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGCAACATTCTTGGACACAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCAACATTCTTGGACACAC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.278 | 0.268 | search_plus_done; http://172.18.8.135:50900/match?q=AGCAACATTCTTGGACACAC&k=0&no_gap=0&offset=0&limit=50
1.002 | 0.724 | search_minus_done; http://172.18.8.135:50900/match?q=GTGTGTCCAAGAATGTTGCT&k=0&no_gap=0&offset=0&limit=39
1.018 | 0.016 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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