GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:42:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pipistrellus nathusii genome assembly, chromosome: 1.
OY882858.1:131935637-131935656
TATATATATTTTTATTGATTTCAGAGAGGA131935637AGCAAGAGGGTAAGAGGGATATAAACATCAATGATGAGAGAGAATTATTA
Pipistrellus nathusii genome assembly, chromosome: 1.
OY883178.1:130939269-130939288
TATATATATTTTTATTGATTTCAGAGAGGA130939269AGCAAGAGGGTAAGAGGGATATAAACATCAATGATGAGAGAGAATTATTA
TSA: Cannabis sativa PK06815.1_1.CasaPuKu mRNA sequence.
JP449207.1:431-450
TTGAGCTTTTCTTGAGGAATGTTGATAAGG431AGCAAGAGGGTAAGAGGGATTGTATCTTGAGAACTCCATGGTTGAGGAAA
Sciurus vulgaris genome assembly, chromosome: 1.
LR738611.1:25295523-25295542
CTGATATCCTCAGATTTCAACTTCTAGAAC25295523ATCCCTCTTACCCTCTTGCTGCTCTGTGCATTTCCACTTTTTTTAACTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCAAGAGGGTAAGAGGGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCAAGAGGGTAAGAGGGAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.123 | 0.114 | search_plus_done; http://172.18.8.135:50400/match?q=AGCAAGAGGGTAAGAGGGAT&k=0&no_gap=0&offset=0&limit=50
0.151 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=ATCCCTCTTACCCTCTTGCT&k=0&no_gap=0&offset=0&limit=47
0.151 | 0.001 | cgi_end;

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