GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-14 21:22:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

sa33e09.x1 Gm-c1004 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1004-1121 3' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
AI443558.1:125-144
AAGGTTCAATTAACTTGATAATACGTAAAC125AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
sf30e09.x1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-1505 3' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
AW310071.1:117-136
AAGGTTCAATTAACTTGATAATACGTAAAC117AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
GM210002B22F3 Gm-r1021 Glycine max cDNA clone Gm-r1021-654 3', mRNA sequence.
AW348611.1:47-66
AAGGTTCAATTAACTTGATAATACGTAAAC47AGCACTGGATGAGTCCAACCAATTATCTCATGTCATAATTAATTAATTAA
GM210009A10A2 Gm-r1021 Glycine max cDNA clone Gm-r1021-3075 3', mRNA sequence.
AW350546.1:72-91
AAGGTTCAATTAACTTGATAATACGTAAAC72AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
so59c10.y1 Gm-c1039 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1039-2251 5' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
BE211229.1:27-46
ACGAGGTAACTTGATAATACGTAAAC27AGCACTGGATGAGTCCAACCAAAGATCTCATGTGATAATTAATTAATTAA
GM830009A11D04 Gm-r1083 Glycine max cDNA clone Gm-r1083-3223 3', mRNA sequence.
BI969772.1:80-99
AAGGTTCAATTAACTTGATAATACGTAAAC80AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
Gm_ck8420 Soybean induced by Salicylic Acid Glycine max cDNA 3', mRNA sequence.
CD417626.1:119-138
AAGGTTCAAGTAACTTGATAATACGTAAAC119AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
gmrtDrNS01_16-A_M13R_B06_046.s2 Water stressed 5h segment 2 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX547944.1:88-107
AAGGTTCAATTAACTTGATAATACGTAAAC88AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
gmrtDrNS01_19-B_M13R_B01_013.s2 Water stressed 5h segment 2 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX703651.1:89-108
AAGGTTCAATTAACTTGATAATACGTAAAC89AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
gmrtDrNS01_23-B_M13R_D05_041.s2 Water stressed 5h segment 2 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX704036.1:52-71
AAGGTTCAATTAACTTGATAATACGTAAAC52AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
GLRA309TR JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
FK021781.1:91-110
AGGGTTCGATTAACTTGATAATACGTAAAC91AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
17051 Glycine max young leaves DNA Glycine max STS genomic, sequence tagged site.
GF097311.1:10-29
TACGTAAAC10AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
Soybean clone JCVI-FLGm-26D22 unknown mRNA.
BT099010.1:91-110
AGGGTTCGATTAACTTGATAATACGTAAAC91AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
Glycine max cultivar Williams 82 chromosome 10.
CP126435.1:43051208-43051227
AAGGTTCAATTAACTTGATAATACGTAAAC43051208AGCACTGGATGAGTCCAACCAAAGATCTCATGTCATAATTAATTAATTAA
sag37d04.y1 Gm-c1081 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1081-943 5' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
BI699474.1:286-305
TTAATTAATTAATTATGACATGAGATCTTT286GGTTGGACTCATCCAGTGCTGTTTACGTATTATCAAGTTAATTGAACCTT
three-D6.txt SSH cDNA library induced by salt from soybean Glycine max cDNA, mRNA sequence.
HO760415.1:364-383
TTAATTAATTAATTATGACATGAGATCTTT364GGTTGGACTCATCCAGTGCTGTTTACGTATTATCAAGTTACTTGAACCTT
Mycetocola sp. JXN-3 chromosome, complete genome.
CP041635.1:287151-287170
CGTCGGTCAGGGTGGCTTCGAGCCCGCCAC287151GGTTGGACTCATCCAGTGCTGCGGTCGGAGCCTCCGGCGCACGCTCGGGC
Volucella zonaria genome assembly, chromosome: 4.
OZ014533.1:147346381-147346400
CTTAGAGAGAGGAGAAGGAGAAAGGTGACT147346381GGTTGGACTCATCCAGTGCTCATACGCATCAGCATCCAATTCTCCACTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCACTGGATGAGTCCAACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCACTGGATGAGTCCAACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.315 | 0.306 | search_plus_done; http://172.18.8.135:50400/match?q=AGCACTGGATGAGTCCAACC&k=0&no_gap=0&offset=0&limit=50
0.438 | 0.123 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTGGACTCATCCAGTGCT&k=0&no_gap=0&offset=0&limit=36
0.441 | 0.003 | cgi_end;

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