GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:54:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Eptesicus nilssonii genome assembly, chromosome: 5.
OX621284.1:62004984-62005003
ATAGTACTTTTTGAGGCATATATTTTTCTA62004984AGCACTTTACACAATTAAGCACATTTATTCTTTAAATAAGTTTGACTTAC
Myotis daubentonii genome assembly, chromosome: 5.
OY725364.1:64279174-64279193
ATAGTACTTTGTGTAGCATACATTTTTCTA64279174AGCACTTTACACAATTAAGCACATTTATTCTTTAAATAATTTCAAGAGAA
RTMNUT1_21_C04.g2_A029 Roots minus micronutrients Pinus taeda cDNA clone RTMNUT1_21_C04_A029 5', mRNA sequence.
DR179350.1:325-344
AGTCAGGATTCAGTAAGGTTTGAAAGTAGA325AGCACTTTACACAATTAAGCTCAAGCAAAACAACTGGCTGATCCATGGTA
Yponomeuta malinellus genome assembly, chromosome: 14.
OX371008.1:9526484-9526503
CACCTTAATGCAAAATCCCCTTTAGAAGTG9526484AGCACTTTACACAATTAAGCTTCTTAGTTTGTTGGTTCTTTTTGGGTCCT
Yponomeuta cagnagella genome assembly, chromosome: 14.
OX371242.1:9646838-9646857
CACCTTAATGCAAAATCCCCATTAGAAGTG9646838AGCACTTTACACAATTAAGCTTCTTAGTTTGATGGTTCTTTTTGGGTCCT
Yponomeuta cagnagella genome assembly, chromosome: 14.
OX371281.1:9634453-9634472
CACCTTAATGCAAAATCCCCATTAGAAGTG9634453AGCACTTTACACAATTAAGCTTCTTAGTTTGTTGGTTCTTTTTGGGTCCT
Plecotus auritus genome assembly, chromosome: 6.
OY734027.1:50281184-50281203
TTCGCTTGAACTTATTTAAAGAATGAATGT50281184GCTTAATTGTGTAAAGTGCTTAGAAAAATGTATGCCACAAAAAGTACTAT
RTFE1_21_A05.g1_A029 Roots minus iron Pinus taeda cDNA clone RTFE1_21_A05_A029 5', mRNA sequence.
DR162864.1:432-451
TACCATGGATCAGCCAGTTGTTTTGCTTGA432GCTTAATTGTGTAAAGTGCTTCTACTTTCAAACCTTACTGAATCCTGACT
Acronicta leporina genome assembly, chromosome: 15.
OX366526.1:4974376-4974395
TGAAAAAGTCGACTTCTGCCATGTATAAAA4974376GCTTAATTGTGTAAAGTGCTAAAAATAGCTGTATAAATGTTAAAACACTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCACTTTACACAATTAAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCACTTTACACAATTAAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.341 | 0.332 | search_plus_done; http://172.18.8.135:50400/match?q=AGCACTTTACACAATTAAGC&k=0&no_gap=0&offset=0&limit=50
0.469 | 0.128 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTAATTGTGTAAAGTGCT&k=0&no_gap=0&offset=0&limit=44
0.471 | 0.002 | cgi_end;

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