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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 20:55:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Avena atlantica genome assembly, chromosome: 5A.
OU342737.1:163366224-163366242
CGGGAGGACCCCGACAACAACCCGCAAAAC163366224AGCAGAAAATTCGGCAGTGTGGCCGGCTCGCTCCACACCTTCACAGGCT
Medicago lupulina genome assembly, chromosome: 3.
OY283141.1:26307599-26307617
CAGGAGCTCCTCCATACAAGAATGCTTAGC26307599AGCAGAAAATTCGGCAGTGTCTCTGGCATCTTTTTCTGCCTGCGTGCAT
Haliaeetus albicilla genome assembly, chromosome: 21.
OX381658.1:26683894-26683912
ACTAAGATGTTCATGAGAAACTTTCTAAGT26683894CACTGCCGAATTTTCTGCTGTTTGGAGAATATATAGCTTGCTAACCGTA
Porphyra yezoensis cDNA, clone:PFL044g03_r, 5'end.
AU193392.1:279-297
GGCGCTGTCGCGGGGTAGCCTCCGAAACCG279CACTGCCGAATTTTCTGCTGCCGTGGACGCGGCGGTTGCGCGGCGGCCA
mth2-181K6RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR503570.1:140-158
ATGCACGCAGGCAGAAAAAGATGCCAGAGA140CACTGCCGAATTTTCTGCTGCTAAACATTCTTGTATGGAGGAGCTCCTG
AUAC-aad59d12.g1 Ascaris suum whole genome shotgun library (PMAJ_4 GSS) Ascaris suum genomic, genomic survey sequence.
ED109647.1:473-491
GTCTGGAAAAAACTTCAAAGGCAGCTTTAG473CACTGCCGAATTTTCTGCTTGACTGCAGCTACGTTCGACGATGTGTAAT
Avena sativa genome assembly, chromosome: 2D.
OU342393.1:143780070-143780088
AAGCCTGTGAAGGTGTGGAGCGAGCGGCGA143780070CACTGCCGAATTTTCTGCTGTTAGGCGGGTTGTTGTCGGGGTCTTCTCG
Avena sativa genome assembly, chromosome: 3D.
OU342394.1:45656943-45656961
AGCCTGTGAAGGTGTGGAGCGAGCCAGCCA45656943CACTGCCGAATTTTCTGCTGTTTGGCGGGTTGTTGTCGGGGTCCTCCCG
Avena sativa genome assembly, chromosome: 17.
OV702295.1:61707439-61707457
AGCCTGTGAAGGTGTGGAGCGAGCCAGCCA61707439CACTGCCGAATTTTCTGCTGTTTGGCGGGTTGTTGTCGGGGTCCTCCCG
Patella ulyssiponensis genome assembly, chromosome: 4.
OY783228.1:30541338-30541356
TAGTCTGGCCCTGAAACCCCACTTCAAGAA30541338CACTGCCGAATTTTCTGCTCTAAAGAAAACCAGTCCATACTATCATCGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGCAGAAAATTCggcAGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCAGAAAATTCggcAGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.394 | 0.385 | search_plus_done; http://172.18.8.135:50400/match?q=AGCAGAAAATTCGGCAGTG&k=0&no_gap=0&offset=0&limit=50
0.529 | 0.135 | search_minus_done; http://172.18.8.135:50400/match?q=CACTGCCGAATTTTCTGCT&k=0&no_gap=0&offset=0&limit=48
0.534 | 0.006 | cgi_end;

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