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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-25 12:04:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Psittacula echo genome assembly, chromosome: 5.
OY725425.1:67500485-67500504
ATTAGCTTCAAGAAAGATGAACGCAATGAG67500485AGCAGAGAAGGGCAAGTTGAATTATCAGGGAGATAGAGAATCTCTCTTAA
454GmaGlobSeed652735 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD910086.1:23-42
TGTATCATAAGCAACGAGTGGA23AGCAGAGAAGGGCAAGTTGAGAGGAAGGAGACACCCATTGCTGCAATGCA
454GmaGlobSeed675853 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD933204.1:23-42
TGTATCATAAGCAACGAGTGGA23AGCAGAGAAGGGCAAGTTGAGAGGAAGGAGACACCCATTGCTGCAATGCA
vsu-ars_003491_LI10Contig_3768 VSU-ARS-L10 Phaseolus acutifolius cDNA, mRNA sequence.
HO778458.1:983-1002
GAGGGTGGTGTATCATTAGCCGCGAGTGAA983AGCAGAGAAGGGCAAGTTGAGAGGAAGGAGACACCCATTGC
vsu-ars_022959_LI15contig_4198 VSU-ARS-L15 Phaseolus acutifolius cDNA, mRNA sequence.
HO797926.1:934-953
GAGGGTGGTGTATCATTAGCAGCGAGTGAA934AGCAGAGAAGGGCAAGTTGAGAGGAAGGAGACACCCATTGCTGCAAC
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC H092C18, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces.
AC274475.1:93487-93506
GAGGGTGGTGTATCATTAGCAACGAGTGAA93487AGCAGAGAAGGGCAAGTTGAGAGGAAGGAGACACCCATTGCTGCCACCAC
Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
AP015036.1:26630240-26630259
GAGGGTGGTGTATCATTAGCAACGAGTGAA26630240AGCAGAGAAGGGCAAGTTGAGAGGAAGGAGACACCCATTGCTGCCACCAC
Vigna unguiculata cultivar Xiabao 2 chromosome Vu08.
CP039351.1:32739674-32739693
GAGGGTGGTGTATCATTAGCAACGAGTGAA32739674AGCAGAGAAGGGCAAGTTGAGAGGAAGGAGACACCCATTGCTGCCACCAC
Glycine max cultivar Williams 82 chromosome 2.
CP126427.1:45576789-45576808
GAGGGTGGTGTATCATAAGCAACGAGTGGA45576789AGCAGAGAAGGGCAAGTTGAGAGGAAGGAGACACCCATTGCTGCAATGCA
Dichetophora obliterata genome assembly, chromosome: 2.
OY986436.1:120550325-120550344
CTTAAAAAAAATAAGCAAGTTGACAGACCC120550325AGCAGAGAAGGGCAAGTTGAGAAAGAATGCAGCAGACAAGTACCTAGTAC
Sequence 60627 from patent US 9029636.
HK969690.1:19-38
ATGGGTGTCTCCTTCCTC19TCAACTTGCCCTTCTCTGCTTCCACTCGTTGCTTATGATACACCACCCTC
saa09h01.y1 Gm-c1058 Glycine soja cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1058-1105 5' similar to TR:Q9THX6 Q9THX6 PUTATIVE ASCORBATE PEROXIDASE, mRNA sequence.
BF715801.1:13-32
GTCTCCTTCCTC13TCAACTTGCCCTTCTCTGCTTCCACTCGTTGCTTATGATACACCACCCTC
saa12e12.y1 Gm-c1058 Glycine soja cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1058-1008 5' similar to TR:Q9THX6 Q9THX6 PUTATIVE ASCORBATE PEROXIDASE, mRNA sequence.
BF715979.1:13-32
GTCTCCTTCCTC13TCAACTTGCCCTTCTCTGCTTCCACTCGTTGCTTATGATACACCACCCTC
Glycine max cDNA clone: GMFL01-40-E12, 5'end.
BW676204.1:172-191
TGCATTGCAGCAATGGGTGTCTCCTTCCTC172TCAACTTGCCCTTCTCTGCTTCCACTCGTTGCTTATGATACACCACCCTC
Glycine max cDNA clone: GMFL01-44-G07, 5'end.
BW679009.1:115-134
TGCATTGCAGCAATGGGTGTCTCCTTCCTC115TCAACTTGCCCTTCTCTGCTTCCACTCGTTGCTTATGATACACCACCCTC
Glycine max cDNA clone: GMFL01-46-F13, 5'end.
BW680328.1:115-134
TGCATTGCAGCAATGGGTGTCTCCTTCCTC115TCAACTTGCCCTTCTCTGCTTCCACTCGTTGCTTATGATACACCACCCTC
Glycine max cDNA clone: GMFL01-51-M16, 5'end.
BW684087.1:57-76
TGCATTGCAGCAATGGGTGTCTCCTTCCTC57TCAACTTGCCCTTCTCTGCTTCCACTCGTTGCTTATGATACACCACCCTC
ALV_016B_E09 Phaseolus vulgaris leaf EST library PV_GEa Phaseolus vulgaris cDNA clone PV_GEa0016B_E09.b1 5', mRNA sequence.
CV531190.1:64-83
GTGGTTGCAGCAATGGGTGTCTCCTCCTTC64TCAACTTGCCCTTCTCTGCTTTCAATCGCTGCTAATGATACACCACCCTC
Glycine max cDNA, clone: GMFL02-24-F11, 5'end.
DB963820.1:115-134
TGCATTGCAGCAATGGGTGTCTCCTTCCTC115TCAACTTGCCCTTCTCTGCTTCCACTCGTTGCTTATGATACACCACCCTC
Pv053B_M13F_H03.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE691517.1:57-76
GTGGTTGCAGCAATGGGTGTCTCCTTCCTC57TCAACTTGCCCTTCTCTGCTTTCAATCGCTGCTAATGATACACCACCCTC
Pv023A_M13F_A05.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE691518.1:71-90
GTGGTTGCAGCAATGGGTGTCTCCTTCCTC71TCAACTTGCCCTTCTCTGCTTTCAATCGCTGCTAATGATACACCACCCTC
Pv029B_M13F_H12.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE691520.1:40-59
GTGGTTGCAGCAATGGGTGTCTCCTTCCTC40TCAACTTGCCCTTCTCTGCTTTCAATCGCTGCTAATGATACACCACCCTC
Pv014B_M13F_G05.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE691522.1:40-59
GTGGTTGCAGCAATGGGTGTCTCCTTCCTC40TCAACTTGCCCTTCTCTGCTTTCAATCGCTGCTAATGATACACCACCCTC
MOPB766TF MOP Vigna unguiculata cDNA 5', mRNA sequence.
FF539350.1:75-94
GTGGTGGCAGCAATGGGTGTCTCCTTCCTC75TCAACTTGCCCTTCTCTGCTTTCACTCGTTGCTAATGATACACCACCCTC
UCRVU07_CCNP7823_b1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vigna unguiculata cDNA clone CCNP7823.b1, mRNA sequence.
FG872225.1:89-108
GTGGTGGCAGCAATGGGTGTCTCCTTCCTC89TCAACTTGCCCTTCTCTGCTTTCACTCGTTGCTAATGATACACCACCCTC
UCRVU07_CCNP9031_b1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vigna unguiculata cDNA clone CCNP9031.b1, mRNA sequence.
FG886519.1:107-126
GTGGTGGCAGCAATGGGTGTCTCCTTCCTC107TCAACTTGCCCTTCTCTGCTTTCACTCGTTGCTAATGATACACCACCCTC
CIAT0001B02 Phaseolus vulgaris leaf EST library CIAT Phaseolus vulgaris cDNA 5', mRNA sequence.
HS089201.1:215-234
GTGGTTGCAGCAATGGGTGTCTCCTTCCTC215TCAACTTGCCCTTCTCTGCTTTCAATCGCTGCTAATGATACACCACCCTC
Vigna angularis mRNA, clone: VES03L04.
HX943477.1:226-245
GTGGTGGCAGCAATGGGTGTCTCCTTCCTC226TCAACTTGCCCTTCTCTGCTTTCACTCGTTGCTAATGATACACCACCCTC
Vigna angularis mRNA, clone: VES07A18.
HX944739.1:54-73
GTGGTGGCAGCAATGGGTGTCTCCTTCCTC54TCAACTTGCCCTTCTCTGCTTTCACTCGTTGCTAATGATACACCACCCTC
TSA: Cajanus cajan cultivar Asha contig10687.Asha mRNA sequence.
EZ658551.1:27-46
TTGCAGCAATGGGTGTCTCCTTCCTC27TCAACTTGCCCTTCTCTGCTTCCACTTGTGGCTTATGATGCACCACCCTC
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC M017I24, *** SEQUENCING IN PROGRESS ***, 13 unordered pieces.
AC272970.1:26725-26744
GTGGTGGCAGCAATGGGTGTCTCCTTCCTC26725TCAACTTGCCCTTCTCTGCTTTCACTCGTTGCTAATGATACACCACCCTC
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC H072H13, *** SEQUENCING IN PROGRESS ***, 21 unordered pieces.
AC274668.1:89717-89736
GTGGTGGCAGCAATGGGTGTCTCCTTCCTC89717TCAACTTGCCCTTCTCTGCTTTCACTCGTTGCTAATGATACACCACCCTC
Sphenostylis stenocarpa genome assembly, chromosome: 8.
OY731405.1:11042844-11042863
GTGGTTGCAGCAATGGGTGTCTCCTTCCTC11042844TCAACTTGCCCTTCTCTGCTTCCACTCGTTGCTTATGAAACACCCCCCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGCAGAGAAGGGCAAGTTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCAGAGAAGGGCAAGTTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.826 | 0.817 | search_plus_done; http://172.18.8.135:50400/match?q=AGCAGAGAAGGGCAAGTTGA&k=0&no_gap=0&offset=0&limit=50
1.888 | 1.063 | search_minus_done; http://172.18.8.135:50400/match?q=TCAACTTGCCCTTCTCTGCT&k=0&no_gap=0&offset=0&limit=40
1.904 | 0.016 | cgi_end;

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