GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:36020004-36020023

GGATCATGCTTGATACCCTTCTTGAACTCC36020004AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:36856413-36856432

GGATCATGCTTGATACCCTTCTTGAACTCC36856413AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:36878244-36878263

GAATCATGCTTGATACCCTTCTTGAACTCC36878244AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAG

Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:34392485-34392504

GGATCATGCTTGATACCCCTCTTGAACTCC34392485AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:35061367-35061386

GGATCATGCTTGATACCCTTCTTGAACTCC35061367AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:39447587-39447606

GGGTCATGCTTGACACCCTTCTTGAACTCG39447587AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:37162670-37162689

GGATCATGCTTGATACCCTTCTTGAACTCC37162670AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:36188587-36188606

GGGTCATGCTTGACACCCTTCTTGAACTCG36188587AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATATA

Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:33380153-33380172

GGATCATGCTTGATACCCTTCTTGAACTCC33380153AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:39752988-39753007

GGGTCATGCTTGACACCCTTCTTGAACTCG39752988AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:36096077-36096096

GGATCATGCTTGATACCCTTCTTGAACTCC36096077AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAG

Malus domestica genome assembly, chromosome: 5.
OU696681.1:39079314-39079333

GGGTCATGCTTGACACCCTTCTTGAACTCG39079314AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus domestica genome assembly, chromosome: 10.
OU696686.1:36537215-36537234

GGATCATGCTTGATACCCTTCTTGAACTCC36537215AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAG

Malus domestica genome assembly, chromosome: 5.
OU744546.1:38635119-38635138

GGGTCATGCTTGACACCCTTCTTGAACTCG38635119AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus domestica genome assembly, chromosome: 10.
OU744551.1:36110195-36110214

GGATCATGCTTGATACCCTTCTTGAACTCC36110195AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus domestica genome assembly, chromosome: 5.
OU744957.1:39092858-39092877

GGGTCATGCTTGACACCCTTCTTGAACTCG39092858AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus domestica genome assembly, chromosome: 10.
OU744962.1:37212498-37212517

GGATCATGCTTGATACCCTTCTTGAACTCC37212498AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus domestica genome assembly, chromosome: 5.
OU744995.1:39901991-39902010

GGGTCATGCTTGACACCCTTCTTGAACTCG39901991AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus domestica genome assembly, chromosome: 10.
OU745000.1:36057613-36057632

GGATCATGCTTGATACCCTTCTTGAACTCC36057613AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Malus x robusta genome assembly, chromosome: 4.
OY720328.1:34729526-34729545

GGATCATGCTTGATACCCTTCTTGAACTCC34729526AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:34717091-34717110

GGATCATGCTTGATACCCTTCTTGAACTCG34717091AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Pyrus communis genome assembly, chromosome: 3.
OY757070.1:24914799-24914818

GGATCATGCTTGATACCCTTCTTGAACTCC24914799AGCAGCGCCAAAATATCCTGCGAAGGGAGCTGCCCCATGGCAGAAATAAA

Piscirickettsia salmonis strain MR5 plasmid unnamed2, complete sequence.
CP039242.1:115630-115649

TTGGAATTACTCGTTATCTTTTGGTGGTGG115630AGCAGCGCCAAAATATCCTGGTAGTAAAAACTATAAGATTATTCCTTTAG

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:7096496-7096515

TTTATTTCTGCCATGGGGCAGCTCCCTTCG7096496CAGGATATTTTGGCGCTGCTCGAGTTCAAGAAGGGTGTCAAGCATGACCC

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:7362704-7362723

TTTATTTCTGCCATGGGGCAGCTCCCTTCG7362704CAGGATATTTTGGCGCTGCTCGAGTTCAAGAAGGGTGTCAAGCATGACCC

Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:6782530-6782549

TTTATTTCTGCCATGGGGCAGCTCCCTTCG6782530CAGGATATTTTGGCGCTGCTCGAGTTCAAGAAGGGTGTCAAGCATGACCC

Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:7260384-7260403

TTTATTTCTGCCATGGGGCAGCTCCCTTCG7260384CAGGATATTTTGGCGCTGCTCGAGTTCAAGAAGGGTGTCAAGCATGACCC

Malus x robusta genome assembly, chromosome: 2.
OY720326.1:7089579-7089598

TTTATTTCTGCCATGGGGCAGCTCCCTTCG7089579CAGGATATTTTGGCGCTGCTCGAGTTCAAGAAGGGTGTCAAGCATGACCC

Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:7469589-7469608

TTTATTTCTGCAATGGGACAGCTCCCTTCG7469589CAGGATATTTTGGCGCTGCTCGAGTTTAAGAAGGGTGTCAAGCATGACCC

Pyrus communis genome assembly, chromosome: 2.
OY757069.1:5761980-5761999

TTTATTTCTGCCATGGGGCAGCTCCCTTCG5761980CAGGATATTTTGGCGCTGCTCGAGTTCAAGAAGGGTGTCAAGCATGACCC

Piscirickettsia salmonis strain SR1 plasmid unnamed2, complete sequence.
CP039229.1:159651-159670

CTAAAGGAATAATCTTATAGTTTTTACTAC159651CAGGATATTTTGGCGCTGCTCCACCACCAAAAGATAACGAGTAATTCCAA

Piscirickettsia salmonis strain BI1 plasmid unnamed2, complete sequence.
CP039236.1:148568-148587

CTAAAGGAATAATCTTATAGTTTTTACTAC148568CAGGATATTTTGGCGCTGCTCCACCACCAAAAGATAACGAGTAATTCCAA

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Debug Info:

0.009 | 0.009 | search_start;
0.119 | 0.110 | search_plus_done; http://172.18.8.135:50400/match?q=AGCAGCGCCAAAATATCCTG&k=0&no_gap=0&offset=0&limit=50
0.172 | 0.053 | search_minus_done; http://172.18.8.135:50400/match?q=CAGGATATTTTGGCGCTGCT&k=0&no_gap=0&offset=0&limit=27
0.178 | 0.006 | cgi_end;

Summary:

Results:

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