GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:59:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

AS1RN23P1F06.ab1 Healthy Roots (RN) Arachis stenosperma cDNA 5', mRNA sequence.
EH042510.1:172-191
TTTCTTGCTGGCGGGTCGGGACACAATCGC172AGCAGCGTTGACTGGATTTTTCATTCTGCTTTCGAAGAACCCGCATGTGG
Dur25.root.ADAA-aaf58a07.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence.
GW935182.1:95-114
TTTCTTGCTGGCGGGTCGGGACACAATCGC95AGCAGCGTTGACTGGATTTTTCATTCTGCTTTCGAAGAACCCGCATGTGG
TSA: Arachis duranensis DurSNP_c4355.Ardu mRNA sequence.
HP004346.1:95-114
TTTCTTGCTGGCGGGTCGGGACACAATCGC95AGCAGCGTTGACTGGATTTTTCATTCTGCTTTCGAAGAACCCGCATGTGG
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:3721002-3721021
CCACATGCGGGTTCTTCGAAAGCAGAATGA3721002AAAATCCAGTCAACGCTGCTGCGATTGTGTCCCGACCCGCCAGCAAGAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCAGCGTTGACTGGATTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCAGCGTTGACTGGATTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.462 | 0.453 | search_plus_done; http://172.18.8.135:50400/match?q=AGCAGCGTTGACTGGATTTT&k=0&no_gap=0&offset=0&limit=50
0.563 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=AAAATCCAGTCAACGCTGCT&k=0&no_gap=0&offset=0&limit=47
0.564 | 0.001 | cgi_end;

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