GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-16 02:41:44, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo genomic scaffold, anchoredscaffold00010.
LN681882.1:5482336-5482357
TATTAAAAAGAATAAAAAGGAAAAAAGATT5482336AGCATCAAGGATAAGAAGCACAATAGGCATATACTTGATTACAAATGCCAAA
Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:20179619-20179640
TTTGGCATTTGTAATCAAGTATATGCCTAT20179619TGTGCTTCTTATCCTTGATGCTAATCTTTTTTCCTTTTTATTCTTTTTAATA
Cucumis melo genomic chromosome, chr_8.
LN713262.1:19491244-19491265
TTTGGCATTTGTAATCAAGTATATGCCTAT19491244TGTGCTTCTTATCCTTGATGCTAATCTTTTTTCCTTTTTATTCTTTTTAATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCATCAAGGATAAGAAGCACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCATCAAGGATAAGAAGCACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50800/match?q=AGCATCAAGGATAAGAAGCACA&k=0&no_gap=0&offset=0&limit=50
0.116 | 0.021 | search_minus_done; http://172.18.8.135:50800/match?q=TGTGCTTCTTATCCTTGATGCT&k=0&no_gap=0&offset=0&limit=49
0.117 | 0.001 | cgi_end;

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