GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-01-10 11:36:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

PP_LEc0013N22f Peach shoot Prunus persica cDNA clone PP_LEc0013N22f, mRNA sequence.
DW347044.1:466-486
TAGGAAGAGATTGTATATACGATTCCTTTA466TTCCTATTTGTATCAATGGCTAACTTCACTAATTATCCAAAAAAGATGTAA
Prunus dulcis DNA, pseudomolecule Pd08.
AP019304.1:15042004-15042024
TAGGAAGAGACTGTATATACGATTCCTTTA15042004TTCCTATTTGTATCAATGGCTAACTTCACTAATTATCCAAAAAAGATGTAA
Antitrichia curtipendula genome assembly, chromosome: 8.
OX579640.1:20405218-20405238
CTCAATTGCAAGATTTTGAAGGAAAACTTC20405218TTCCTATTTGTATCAATGGCTATGGATTAATATTGTATCATAGTCTAGTTG
Anania crocealis genome assembly, chromosome: 12.
OX438861.1:7709224-7709244
ATTTTTGTATAAGCCTTAGTATAAGTATAG7709224TTCCTATTTGTATCAATGGCTGTATTAAACAAATAAAAAAAAAACTCACCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCCATTGATACAAATAGGAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCCATTGATACAAATAGGAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=AGCCATTGATACAAATAGGAA&k=0&no_gap=0&offset=0&limit=50
0.151 | 0.053 | search_minus_done; http://172.18.8.135:50400/match?q=TTCCTATTTGTATCAATGGCT&k=0&no_gap=0&offset=0&limit=50
0.153 | 0.003 | cgi_end;

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