GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:41:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ammodytes marinus genome assembly, chromosome: 16.
OX465160.1:13166299-13166318
AGGAAATGTAGACGAATAGTTTTTCTTAGA13166299AGCCTTAGTATTTTGTTGATAATCTGTTATGGTTATCTGTTGTGTCGTCT
Sequence 13144 from Patent WO2016022021.
LP658709.1:4509-4528
ATAAACAATAGTGGCAAAGATGCATGCAAA4509AGCCTTAGTATTTTGTTGATAAATGAAATAAGATGCATGCTGAAGCCTAC
Sequence 13295 from Patent WO2016022021.
LP658860.1:3997678-3997697
ATAAACAATAGTGGCAAAGATGCATGCAAA3997678AGCCTTAGTATTTTGTTGATAAATGAAATAAGATGCATGCTGAAGCCTAC
Sequence 13296 from Patent WO2016022021.
LP658861.1:3832009-3832028
ATAAACAATAGTGGCAAAGATGCATGCAAA3832009AGCCTTAGTATTTTGTTGATAAATGAAATAAGATGCATGCTGAAGCCTAC
Sequence 13297 from Patent WO2016022021.
LP658862.1:788965-788984
ATAAACAATAGTGGCAAAGATGCATGCAAA788965AGCCTTAGTATTTTGTTGATAAATGAAATAAGATGCATGCTGAAGCCTAC
Sequence 17 from patent US 10669593.
MV319385.1:478455-478474
ATAAACCATAGTGGCAAAGATGCATGCAAA478455AGCCTTAGTATTTTGTTGATAAATGAAATAAGATGCATGCTGAAGCCTAC
Sequence 17 from patent US 11560601.
OS201569.1:478455-478474
ATAAACCATAGTGGCAAAGATGCATGCAAA478455AGCCTTAGTATTTTGTTGATAAATGAAATAAGATGCATGCTGAAGCCTAC
Elaeis guineensis microsatellite DNA, clone mEgCIR0046.
AJ271635.1:96-115
ATAAACCATAGTGGCAAAGATGCATGCAAA96AGCCTTAGTATTTTGTTGATAAATGAAATAAGATGCATGCTGAAGCCTAC
Polietes domitor genome assembly, chromosome: 3.
OX377620.1:156232773-156232792
GCAGCTTGTTATCTCGGCTTAAAGAAAAAC156232773AGCCTTAGTATTTTGTTGATCAATGTTATTGTTTTTGGTGTGGTGGTGGT
Epinotia ramella genome assembly, chromosome: 3.
OX388203.1:17666576-17666595
CCTGGATTTATTTATCGCTATGCAAATACA17666576AGCCTTAGTATTTTGTTGATGTTTTTGTTACTTCAAGAAACAAAAGCATT
Hyperoplus immaculatus genome assembly, chromosome: 16.
OX442364.1:16747911-16747930
AGACGACACAACAGATAACCATAACAGATT16747911ATCAACAAAATACTAAGGCTTCTAAGAAAAACTATTCGTCTACATTTCCT
Spergularia marina genome assembly, chromosome: 4.
OY804547.1:2173656-2173675
TGACAAGAATGCAAGCCACCATGGTGCAAA2173656ATCAACAAAATACTAAGGCTAGCCTACAAAATCTCGAAAGCCAAGTGAGC
Spergularia marina genome assembly, chromosome: 4.
OY804547.1:2184789-2184808
TGACAAGTATGCAAGCCACCATGGTGCAAA2184789ATCAACAAAATACTAAGGCTAGCCTACAAAATCTCGAAAGCCAAGTGAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCCTTAGTATTTTGTTGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCCTTAGTATTTTGTTGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.375 | 0.366 | search_plus_done; http://172.18.8.135:50400/match?q=AGCCTTAGTATTTTGTTGAT&k=0&no_gap=0&offset=0&limit=50
0.404 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=ATCAACAAAATACTAAGGCT&k=0&no_gap=0&offset=0&limit=40
0.406 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).