GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 21:14:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-08.
CP023120.1:14698912-14698931
TTACACAATTTTTTCAGATTCAAACCACAC14698912AGCGTTCAACCCAAACAAAATGGTTTCATTCCAAATGAATCCTACCTTTT
Sambucus nigra genome assembly, chromosome: 3.
OX422209.1:531864876-531864895
ATTAAAACCATCCAAACTAGTTGCCCCGTC531864876AGCGTTCAACCCAAACAAAACATCCTGAATTTCTTCCAATGAAGGGACTG
Sambucus nigra genome assembly, chromosome: 12.
OX422218.1:467650511-467650530
ATTAAAACCATTCGGACCGGCCGCCCCGTC467650511AGCGTTCAACCCAAACAAAACATCCTGAATTTCTTCCAATGAAGGGACTG
Sambucus nigra genome assembly, chromosome: 17.
OX422223.1:346927096-346927115
ATTAAAACCATCCGGATCGACCGCCCGGTC346927096AGCGTTCAACCCAAACAAAACAAAATGAATTTCTTCCAACGAAGGGACTG
ICPM1C02 Microsatellite enriched genomic DNA library of pigeonpea Cajanus cajan genomic clone ICPM1C02 5', genomic survey sequence.
FI131371.1:299-318
AGTTTATTCTCACTCTATGTGGTTGTATGT299TTTTGTTTGGGTTGAACGCTACTTGCAATATTAGATCAAGTGATTCTGCT
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:222097695-222097714
CAGTCCCTTCGTTGGAAGAAATTCAAGATG222097695TTTTGTTTGGGTTGAACGCTGATGGGGCGGTCGGTCCGGATGGTTTCAAT
Sambucus nigra genome assembly, chromosome: 10.
OX422216.1:624592540-624592559
CAGTCCCTTCGTTGGAAGAAATTCAGGATG624592540TTTTGTTTGGGTTGAACGCTGACGGGGCGGCCGGTCCGGATGGTTTTAAT
Nephrotoma guestfalica genome assembly, chromosome: 2.
OY829914.1:284645474-284645493
AGGGCCTGATTACTTGGAGCCTTTTTAACA284645474TTTTGTTTGGGTTGAACGCTTTTGACAAAATTTAGTGGGGCAGAGGCTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCGTTCAACCCAAACAAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCGTTCAACCCAAACAAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=AGCGTTCAACCCAAACAAAA&k=0&no_gap=0&offset=0&limit=50
0.153 | 0.050 | search_minus_done; http://172.18.8.135:50400/match?q=TTTTGTTTGGGTTGAACGCT&k=0&no_gap=0&offset=0&limit=46
0.156 | 0.003 | cgi_end;

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