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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 02:52:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Squalius cephalus genome assembly, chromosome: 16.
OX439262.1:10991187-10991204
AGACGTGCCGTGTGATTCTGTGGAGGAGCC10991187AGCGTTCTCTCAGTGTTGGCTAGTGCAGTCAGAGTCTGAAACTAGAAT
Borostomias antarcticus genome assembly, chromosome: 6.
OX465209.1:25794657-25794674
TGCTCACGAGTACTGAATATTCGTACTGTC25794657AGCGTTCTCTCAGTGTTGCTGAGCTCATTCTCATGTTTTTGCCCTGAA
Nannobrachium achirus genome assembly, chromosome: 10.
OY997647.1:3205374-3205391
AAGACAGACAAAGCTCTGTTGAGTCAACAG3205374AGCGTTCTCTCAGTGTTGAGCTGCTGTATCGATCGTTTCACAACCTAC
Nannobrachium achirus genome assembly, chromosome: 10.
OY997647.1:3705119-3705136
AAGGCAGACAAAGCTCTGTTGAGTCAACAG3705119AGCGTTCTCTCAGTGTTGAGCTGCTGTATCGATCGTTTCACAACCTAC
Lotus japonicus genomic DNA, chromosome 2, clone: LjT14P21, TM0929.
AP007687.2:4927-4944
GATCTGAACGATATGGGAAAGGAGAGTAGC4927AGCGTTCTCTCAGTGTTGCAGTGGCTGAATCGGGTGGTTTCAAAGCCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:11009864-11009881
GATCTGAACGATATGGGAAAGGAGAGTAGC11009864AGCGTTCTCTCAGTGTTGCAGTGGCTGAATCGGGTGGTTTCAAAGCCT
Phytophthora plurivora strain TJ71 chromosome 13.
CP125268.1:3924952-3924969
AGACTTCAGATGAGTGAAGTAAACGGCGTT3924952AGCGTTCTCTCAGTGTTGTTTGAATACGTTTTTGCTTCCACATCTGAC
Cryptosula pallasiana genome assembly, chromosome: 10.
OX183139.1:24282724-24282741
ATTAATAATTGTATTAATTAACGTGTCACC24282724AGCGTTCTCTCAGTGTTGTTTTGAAAATAATCGATAACACAGACTAAT
Hydrotaea diabolus genome assembly, chromosome: 1.
OY740716.1:70958580-70958597
TCCTAAGCGCTAAGTAGGGCAGAGTTAGAG70958580AGCGTTCTCTCAGTGTTGTTATATTAATTTGGTTAATACTACGGCGGA
Maratus speciosus genome assembly, chromosome: 3.
OZ010789.1:129487922-129487939
ATTATTTATTCTTATCTTACAGCTTTGGCA129487922AGCGTTCTCTCAGTGTTGGGAGAAGAGGAACGTTTGACGAAACTATGT
Epinephelus fuscoguttatus DNA, LG8, complete sequence.
AP022682.1:7797738-7797755
TGGTCCGTTTGGCTGAAGAGGTTTAAACTG7797738CAACACTGAGAGAACGCTGAGTTATGAAGTGCAATGTTCTTGCTATTA
Aquila chrysaetos chrysaetos genome assembly, chromosome: 1.
LR606181.1:78850368-78850385
CACTTCTGGGCGTTGAGAGGCAGCACAGTT78850368CAACACTGAGAGAACGCTGGCACATAGCGCTTCAGGTCATTGTGAATT
Scyliorhinus canicula genome assembly, chromosome: 9.
LR744038.1:6282115-6282132
TCGGTGCACAACAATCTTGGCTACCACTCC6282115CAACACTGAGAGAACGCTGGACTGTCAGCGTTGCTATTTTTGTTTTGA
Scomber scombrus genome assembly, chromosome: 6.
OY829923.1:30627760-30627777
GTGCACGGCTGCTGATTCTCACTTACAGTG30627760CAACACTGAGAGAACGCTGACACGAGGCGGAACAGTGCACCCAAAGGA
Lotus japonicus genomic DNA, chromosome 2, clone: LjT06K11, TM0002.
AP004467.1:1746-1763
AGGCTTTGAAACCACCCGATTCAGCCACTG1746CAACACTGAGAGAACGCTGCTACTCTCCTTTCCCATATCGTTCAGATC
Limnephilus marmoratus genome assembly, chromosome: 11.
OU862916.1:28388653-28388670
TCTAAAATAGTGATTGTTCTTTCACCAAAG28388653CAACACTGAGAGAACGCTTTAATTGAAAAATTTGTATCTTACCCAATA
Leptodirus hochenwarti genome assembly, chromosome: 5.
OX371180.1:5847829-5847846
AAACTTTAGGATGGGTCTCAACTACCCAAC5847829CAACACTGAGAGAACGCTCTAAACCACTATTACACTGGGAAATAATAC
Callimorpha dominula genome assembly, chromosome: 4.
OX456994.1:14554936-14554953
CAGCGTGATGGATTATGGCTTAACCCATGT14554936CAACACTGAGAGAACGCTCATGATCAGCAATGGGACAGTTACAGTGCA
Salticus scenicus genome assembly, chromosome: 2.
OZ005649.1:159010408-159010425
ACATTGTTTCGTCAAACGTTCCTCTTCTTC159010408CAACACTGAGAGAACGCTTGCCAAAGCTGTAATAAAAGAATAAATAAG
Maratus michaelseni genome assembly, chromosome: 1.
OZ007587.1:383290157-383290174
ACATAGTTTCGTCAAACGTTCCTCTTCTTC383290157CAACACTGAGAGAACGCTTGCCAAAGCTGTAAGTTAAAAAATAAATAA
Maratus speciosus genome assembly, chromosome: 5.
OZ010791.1:473175997-473176014
ATGAGCCCCCCAAAAATCATGAAAGACTTA473175997CAACACTGAGAGAACGCTATTCAAATATTACACTTTATATACATGAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGCGTTCTCTCAGTGTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCGTTCTCTCAGTGTTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.389 | 0.380 | search_plus_done; http://172.18.8.135:50400/match?q=AGCGTTCTCTCAGTGTTG&k=0&no_gap=0&offset=0&limit=50
0.525 | 0.136 | search_minus_done; http://172.18.8.135:50400/match?q=CAACACTGAGAGAACGCT&k=0&no_gap=0&offset=0&limit=40
0.533 | 0.008 | cgi_end;

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