GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 21:07:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cottoperca gobio genome assembly, chromosome: 16.
LR131923.1:3550943-3550963
CCCGTCTTTAAACATTTCTTTTTGACTATT3550943AGCTCCTCAACTGCCTTTTATGTGAATGAGAGGGAGCCGAGTGCACACTTT
Echeneis naucrates genome assembly, chromosome: 6.
LR584047.1:17134506-17134526
CACCACAGTCTGTCTTTGTTTCTTTTGAGT17134506AGCTCCTCAACTGCCTTTTATGTGAATGAGGGGGAGCTTTATACAAGCAGA
Trachurus trachurus genome assembly, chromosome: 16.
LR991639.1:14560164-14560184
AGCCTGTCTTTACTCTTTTTCTTTTTGAAT14560164AGCTCCTCAACTGCCTTTTATGTGAATGAGAGGGAGCTTTATATGAGCAGA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:148601655-148601675
ATGAATTGGTCAGCAAGGAAGACGACAGGA148601655AGCTCCTCAACTGCCTTTTATAATATAAGTAATAAAATAAAATAATATATA
Meconema thalassinum genome assembly, chromosome: 4.
OX336392.1:539205644-539205664
ATCCCAATCAAAAAAGATCAGAAGCTCAAA539205644AGCTCCTCAACTGCCTTTTATACATGCGCATAGTAATCATCATTTTCCAGT
KS14007B12 KS14 Capsicum annuum cDNA, mRNA sequence.
GD058064.1:380-400
TATATATTATTTTATTTTATTACTTATATT380ATAAAAGGCAGTTGAGGAGCT
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:167698105-167698125
TATATATTATTTTATTTTATTACTTATATT167698105ATAAAAGGCAGTTGAGGAGCTTCCTGTCGTCTTCCTTGCTGACCAATTCAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCTCCTCAACTGCCTTTTAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCTCCTCAACTGCCTTTTAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.126 | 0.117 | search_plus_done; http://172.18.8.135:50400/match?q=AGCTCCTCAACTGCCTTTTAT&k=0&no_gap=0&offset=0&limit=50
0.245 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=ATAAAAGGCAGTTGAGGAGCT&k=0&no_gap=0&offset=0&limit=45
0.247 | 0.001 | cgi_end;

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