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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:29:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Citrus sinensis genome assembly, chromosome: 5.
OY754322.1:27616170-27616193
ATAGAGAAAAGTTGGGAGCTTCAAATTGCT27616170AGCTCGCAAGTAAGGCTCATTCCCTAAATGGGAATCTCTCCAATCCATGAGAAC
Sequence 16 from Patent WO2013111018.
JC293910.1:2532-2555
GTTCTCATGGATTGGAGAGATTCCCATTTA2532GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Sequence 16 from patent US 9574202.
KH569199.1:2532-2555
GTTCTCATGGATTGGAGAGATTCCCATTTA2532GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
IC0AAA12DE07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY263837.1:832-855
GTTCTCATGGATTGGAGAGATTCCCATTTA832GGGAATGAGCCTTACTTGCGAGCTACCAATTTGAAGCTCCCAACTTTTCTCTAT
IC0AAA63BH06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY285338.1:440-463
GTTCTCATGGATTGGAGAGATTCCCATTTA440GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
IC0AAA75AA05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY290292.1:828-851
GTTCTCATGGATTGGAGAGATTCCCATTTA828GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCCACTTTTCTCTAT
IC0AAA82DC04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY293434.1:673-696
GTTCTCATGGATTGGAGAGATTCCCATTTA673GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
IC0AAA87AD05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY295001.1:555-578
GTTCTCATGGATTGGAGAGATTCCCATTTA555GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
IC0AAA94BF08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY298022.1:852-875
GTTCTCATGGATTGGAGAGATTCCCATTTA852GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
IC0AAA75AA05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA75AA05, mRNA sequence.
FC882711.1:828-851
GTTCTCATGGATTGGAGAGATTCCCATTTA828GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
IC0AAA82DC04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA82DC04, mRNA sequence.
FC892165.1:673-696
GTTCTCATGGATTGGAGAGATTCCCATTTA673GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
IC0AAA63BH06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA63BH06, mRNA sequence.
FC902035.1:440-463
GTTCTCATGGATTGGAGAGATTCCCATTTA440GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
IC0AAA87AD05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA87AD05, mRNA sequence.
FC915068.1:555-578
GTTCTCATGGATTGGAGAGATTCCCATTTA555GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus unshiu CitLCYb2 mRNA for LCYb2, partial cds.
AB719392.1:774-797
GTTCTCATGGATTGGAGAGATTCCCATTTA774GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus sinensis CitLCYb2 mRNA for LCYb2, partial cds.
AB719393.1:777-800
GTTCTCATGGATTGGAGAGATTCCCATTTA777GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus limon CitLCYb2 mRNA for LCYb2, partial cds.
AB719394.1:777-800
GTTCTCATGGATTGGAGAGATTCCCATTTA777GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus sinensis capsanthin/capsorubin synthase (CCS) gene, complete cds.
AF169241.1:2532-2555
GTTCTCATGGATTGGAGAGATTCCCATTTA2532GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus sinensis cultivar Navel lycopene beta-cyclase (bLCY2) mRNA, bLCY2-a allele, partial cds.
FJ516403.1:811-834
GTTCTCATGGATTGGAGAGATTCCCATTTA811GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus x paradisi cultivar Star Ruby lycopene beta-cyclase (bLCY2) mRNA, bLCY2-b allele, partial cds.
FJ516404.1:811-834
GTTCTCATGGATTGGAGAGATTCCCATTTA811GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus x paradisi chromoplast lycopene beta-cyclase (BLCY2) mRNA, complete cds; nuclear gene for chromoplast product.
GQ214768.1:811-834
GTTCTCATGGATTGGAGAGATTCCCATTTA811GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus maxima LCY2B mRNA, complete cds.
KP462731.1:811-834
GTTCTCATGGATTGGAGAGATTCCCATTTA811GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus sinensis lycopene beta-cyclase (LCYb2a) mRNA, complete cds.
MG492007.1:811-834
GTTCTCATGGATTGGAGAGATTCCCATTTA811GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus sinensis lycopene beta-cyclase (LCYb2b) mRNA, complete cds.
MG492008.1:811-834
GTTCTCATGGATTGGAGAGATTCCCATTTA811GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus sinensis lycopene beta-cyclase 2 (BLCY2) gene, BLCY2-a allele, complete cds.
OP441054.1:811-834
GTTCTCATGGATTGGAGAGATTCCCATTTA811GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus sinensis lycopene beta-cyclase 2 (BLCY2) gene, BLCY2-b allele, complete cds.
OP441055.1:811-834
GTTCTCATGGATTGGAGAGATTCCCATTTA811GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT
Citrus sinensis genome assembly, chromosome: 5.
OY754322.1:17220278-17220301
GTTCTCATGGATTGGAGAGATTCCCATTTA17220278GGGAATGAGCCTTACTTGCGAGCTAGCAATTTGAAGCTCCCAACTTTTCTCTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGCTCGCAAGTAAGGCTCATTCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCTCGCAAGTAAGGCTCATTCCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=AGCTCGCAAGTAAGGCTCATTCCC&k=0&no_gap=0&offset=0&limit=50
0.850 | 0.733 | search_minus_done; http://172.18.8.135:50400/match?q=GGGAATGAGCCTTACTTGCGAGCT&k=0&no_gap=0&offset=0&limit=49
0.867 | 0.017 | cgi_end;

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