GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 17:47:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ailanthus altissima genome assembly, chromosome: 20.
OX327702.1:11728644-11728664
TTTAGATATCACTAACTCTTATAACCTGAT11728644AGCTCTTGTAATATCCAATCCCTATTAGTAGTATTGGCGCTTAGATTTTAG
Lotus japonicus genomic DNA, chromosome 1, clone: LjT37G03, TM0675.
AP007507.2:90847-90867
CTTAGTGCCAGATAAGTTTAGAGTTTCTTA90847GGATTGGATATTACAAGAGCTGTATAAAAATCTTCTCACAATTAGACTCAT
Lotus japonicus genomic DNA, chromosome 1, clone: LjB70O07, BM1196.
AP007888.2:154710-154730
CTTAGTGCCAGATAAGTTTAGAGTTTCTTA154710GGATTGGATATTACAAGAGCTGTATAAAAATCTTCTCACAATTAGACTCAT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:104003973-104003993
CTTAGTGCCAGATAAGTTTAGAGTTTCTTA104003973GGATTGGATATTACAAGAGCTGTATAAAAATCTTCTCACAATTAGACTCAT
Caenorhabditis sinica genome assembly, chromosome: I.
OZ009942.1:5905715-5905735
CATTCCCTTCCAAAGTGGATTGTTTTTGGA5905715GGATTGGATATTACAAGAGCTCATAACTAGATCAAATGTTTGCTTCCAACT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCTCTTGTAATATCCAATCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCTCTTGTAATATCCAATCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=AGCTCTTGTAATATCCAATCC&k=0&no_gap=0&offset=0&limit=50
0.134 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=GGATTGGATATTACAAGAGCT&k=0&no_gap=0&offset=0&limit=49
0.136 | 0.003 | cgi_end;

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