GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 18:02:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pipistrellus nathusii genome assembly, chromosome: 4.
OY882861.1:81676458-81676477
AGCTAAGGAGTTCCAAATTACTGGGAGGTC81676458AGCTTCCCATCCACATTCTGGCCAGTCTTATGGAATAAATCCTGAAGTTC
Pipistrellus nathusii genome assembly, chromosome: 4.
OY883181.1:81679725-81679744
AGCTAAGGAGTTCCAAATTACTGGGAGGTC81679725AGCTTCCCATCCACATTCTGGCCAGTCTTATGGAATAAATCCTGAAGTTC
Rhinatrema bivittatum genome assembly, chromosome: 8.
LR584394.1:97576176-97576195
ACAGGGTCTGTAACTTGCACCTCAGGGACT97576176AGCTTCCCATCCACATTCTGTTTATGCTCCTGGGCCCACTCAAAGAACTC
Melinaea menophilus n. ssp. AW-2005 genome assembly, chromosome: 10.
OU911047.1:6329337-6329356
ACATTATGAAAATTGGGCGAATCATTATTT6329337AGCTTCCCATCCACATTCTGGCATATTTTTTTAATTAGTATTATTATTGT
Porphyra yezoensis cDNA, clone:PFL020b02_r, 5'end.
AU191687.1:356-375
TTTGAGGTGCAGCCGATGAGCGTTAACCAC356CAGAATGTGGATGGGAAGCTCGCCACCTGCCCGGTCAATGGTACCGACAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGCTTCCCATCCACATTCTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCTTCCCATCCACATTCTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.167 | 0.159 | search_plus_done; http://172.18.8.135:50400/match?q=AGCTTCCCATCCACATTCTG&k=0&no_gap=0&offset=0&limit=50
0.242 | 0.075 | search_minus_done; http://172.18.8.135:50400/match?q=CAGAATGTGGATGGGAAGCT&k=0&no_gap=0&offset=0&limit=46
0.243 | 0.001 | cgi_end;

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