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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:40:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 20453 from Patent WO2008034648.
FB801180.1:1366-1385
AACAGGTTATGGCACAGCAACCTTAGGCTC1366AGCTTTCAGTCTCGGCGAATGGATGACACCATGATGTCTCCGTGTATGAT
Sequence 20455 from Patent WO2008034648.
FB801182.1:1366-1385
AACAGGTACTGGCAAAGCAACCTGAGGCTG1366AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Sequence 72452 from Patent WO2008034648.
FB853179.1:1366-1385
AACAGGTTATGGCACAGCAACCTTAGGCTC1366AGCTTTCAGTCTCGGCGAATGGATGACACCATGATGTCTCCGTGTATGAT
Sequence 72454 from Patent WO2008034648.
FB853181.1:1366-1385
AACAGGTACTGGCAAAGCAACCTGAGGCTG1366AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Sequence 20453 from Patent EP2090662.
HB671239.1:1366-1385
AACAGGTTATGGCACAGCAACCTTAGGCTC1366AGCTTTCAGTCTCGGCGAATGGATGACACCATGATGTCTCCGTGTATGAT
Sequence 20455 from Patent EP2090662.
HB671241.1:1366-1385
AACAGGTACTGGCAAAGCAACCTGAGGCTG1366AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Sequence 72452 from Patent EP2090662.
HB723238.1:1366-1385
AACAGGTTATGGCACAGCAACCTTAGGCTC1366AGCTTTCAGTCTCGGCGAATGGATGACACCATGATGTCTCCGTGTATGAT
Sequence 72454 from Patent EP2090662.
HB723240.1:1366-1385
AACAGGTACTGGCAAAGCAACCTGAGGCTG1366AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Mdfw2054o13.y1 Mdfw Malus domestica cDNA clone Mdfw2054o13 5' similar to TR:O49819 O49819 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE, mRNA sequence.
CN994687.1:135-154
AACAAGTACTGGCAAAGCAACCTGAGGCTG135AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCACGAT
TSA: Pyrus communis mRNA, contig: lc29565.
FX637778.1:406-425
AACAGGTTATGGAAAAGCAACCTTAGGCTC406AGCTTTCAGTCTCGGCGAATGGATGACAACATGATGTCTCCGTGCATGAT
TSA: Pyrus x bretschneideri Unigene5182_XinShao mRNA sequence.
JR600438.1:505-524
AACAGGTACTGGAAAAGCAACCTTAGGCTG505AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Malus domestica MdACS-5A mRNA for 1-aminocyclopropane-1-carboxylate synthase, complete cds.
AB034992.1:1446-1465
AACAGGTACTGGCAAAGCAACCTGAGGCTG1446AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Malus domestica MdACS-5B mRNA for 1-aminocyclopropane-1-carboxylate synthase, complete cds.
AB034993.1:1406-1425
AACAGGTTATGGCACAGCAACCTTAGGCTC1406AGCTTTCAGTCTCGGCGAATGGATGACACCATGATGTCTCCGTGTATGAT
Pyrus x bretschneideri PbACS3 mRNA for 1-aminocyclopropane-1-carboxylate synthase, complete cds.
AB265796.1:1524-1543
AACAGGTACTGGAAAAGCAACCTTAGGCTG1524AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Pyrus pyrifolia var. culta mRNA for 1-aminocyclopropane-1-carboxylate synthase, complete cds.
AB610771.1:1397-1416
AACAGGTACTGGAAAAGCAACCTTAGGCTG1397AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:13626120-13626139
AACAGGTTATGGCAAAGCAACCTTAGGCTC13626120AGCTTTCAGTCTCGGCGAATGGATGACACCATGATGTCTCCGTGCATGAT
Malus hybrid cultivar cultivar Flame chromosome 14.
CP141923.1:13293735-13293754
AACAGGTACTGGCAAAGCAACCTGAGGCTG13293735AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCTTGCATGAT
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141932.1:14398808-14398827
AACAGGTTATGGCACAGCAACCTTAGGCTC14398808AGCTTTCAGTCTCGGCGAATGGATGACACCATGATGTCTCCGTGTATGAT
Malus hybrid cultivar cultivar Flame chromosome 14.
CP141940.1:14208576-14208595
AACAGGTACTGGCAAAGCAACCTGAGGCTG14208576AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141961.1:13488434-13488453
AACAGGTTATGGCAAAGCAACCTTAGGCTC13488434AGCTTTCAGTCTCGGCGAATGGATGACACCATGATGTCTCCGTGCATGAT
Malus hybrid cultivar cultivar Royalty chromosome 14.
CP141966.1:13018380-13018399
AACAGGTACTGGCAAAGCAACCTGAGGCTG13018380AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141978.1:13360923-13360942
AACAGGTTATGGCAAAGCAACCTTAGGCTC13360923AGCTTTCAGTCTCGGCGAATGGATGACACCATGATGTCTCCGTGCATGAT
Malus hybrid cultivar cultivar Royalty chromosome 14.
CP141983.1:14423777-14423796
AACAGGTACTGGCAAAGCAACCTGAGGCTG14423777AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Eriobotrya japonica cultivar Zaozhong No. 6 1-aminocyclopropane-1-carboxylate synthase mRNA, complete cds.
GQ370519.3:1366-1385
AATAGGTACTGGCAAAGCAACCTTAGGTTA1366AGCTTTCAGTCTCGGCGAATGGATGACGTCATGATGCCTCCGTGCATGAT
Malus x robusta genome assembly, chromosome: 15.
OY720339.1:14002284-14002303
AACAGGTACTGGCAAAGCAACCTGAGGCTG14002284AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Crataegus laevigata genome assembly, chromosome: 16.
OY756953.1:14225694-14225713
AACAGGTACTGGCAAAGCAACCTTAAGCTG14225694AGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGAT
Mdfw2054O13_e18526.g1 Mdfw Malus domestica cDNA 5' similar to dbj|BAA92350.1| 1-aminocyclopropane-1-carboxylate synthase [Malus x domestica], mRNA sequence.
GO568139.1:521-540
ATCATGCACGGAGACATCATGATGTCATCC521ATTCGCCGAGACTGAAAGCTCAGCCTCAGGTTGCTTTGCCAGTACCTGTT
Mdlv4-4042P19_e28775.b1 Mdlv4 Malus domestica cDNA 3' similar to dbj|BAA92351.1| 1-aminocyclopropane-1-carboxylate synthase [Malus x domestica], mRNA sequence.
GO577767.1:420-439
ATCATACACGGAGACATCATGGTGTCATCC420ATTCGCCGAGACTGAAAGCTGAGCCTAAGGTTGCTGTGCCATAACCTGTT
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143363.1:21053854-21053873
ATCATACACGGAGACATCATGGTGTCATCC21053854ATTCGCCGAGACTGAAAGCTGAGCCTAAGGTTGCTGTGCCATAACCTGTT
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143371.1:18047530-18047549
ATCATGCACGGAGACATCATGATGTCATCC18047530ATTCGCCGAGACTGAAAGCTCAGCCTCAGGTTGCTTTGCCAGTACCTGTT
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143380.1:19258838-19258857
ATCATGCACGGAGACATCATGTTGTCATCC19258838ATTCGCCGAGACTGAAAGCTGAGCCTAAGGTTGCTTTGCCATAACCTGTT
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143388.1:15882163-15882182
ATCATGCACGGAGACATCATGATGTCATCC15882163ATTCGCCGAGACTGAAAGCTCAGCTTAAGGTTGCTTTGCCAGTACCTGTT
Malus sylvestris genome assembly, chromosome: 6.
OU696508.1:21223849-21223868
ATCATGCACGGAGACATCATGGTGTCATCC21223849ATTCGCCGAGACTGAAAGCTGAGCCTAAGGTTGCTTTGCCATAACCTGTT
Malus sylvestris genome assembly, chromosome: 14.
OU696516.1:16494764-16494783
ATCATGCACGGAGACATCATGATGTCATCC16494764ATTCGCCGAGACTGAAAGCTCAGCCTCAGGTTGCTTTGCCAGTACCTGTT
Malus domestica genome assembly, chromosome: 6.
OU696682.1:21182555-21182574
ATCATACACGGAGACATCATGGTGTCATCC21182555ATTCGCCGAGACTGAAAGCTGAGCCTAAGGTTGCTGTGCCATAACCTGTT
Malus domestica genome assembly, chromosome: 14.
OU696690.1:17685919-17685938
ATCATGCACGGAGACATCATGATGTCATCC17685919ATTCGCCGAGACTGAAAGCTCAGCCTCAGGTTGCTTTGCCAGTACCTGTT
Malus domestica genome assembly, chromosome: 6.
OU744547.1:21064942-21064961
ATCATACACGGAGACATCATGGTGTCATCC21064942ATTCGCCGAGACTGAAAGCTGAGCCTAAGGTTGCTGTGCCATAACCTGTT
Malus domestica genome assembly, chromosome: 14.
OU744555.1:17998307-17998326
ATCATGCACGGAGACATCATGATGTCATCC17998307ATTCGCCGAGACTGAAAGCTCAGCCTCAGGTTGCTTTGCCAGTACCTGTT
Malus domestica genome assembly, chromosome: 6.
OU744958.1:21005866-21005885
ATCATACACGGAGACATCATGGTGTCATCC21005866ATTCGCCGAGACTGAAAGCTGAGCCTAAGGTTGCTGTGCCATAACCTGTT
Malus domestica genome assembly, chromosome: 14.
OU744966.1:18033016-18033035
ATCATGCACGGAGACATCATGATGTCATCC18033016ATTCGCCGAGACTGAAAGCTCAGCCTCAGGTTGCTTTGCCAGTACCTGTT
Malus domestica genome assembly, chromosome: 6.
OU744996.1:17284646-17284665
ATCATGCACGGAGACATCATGGTGTCATCC17284646ATTCGCCGAGACTGAAAGCTGAGCCTAAGGTTGCTTTGCCATAACCTGTT
Malus domestica genome assembly, chromosome: 14.
OU745004.1:18179351-18179370
ATCATGCACGGAGACATCATGATGTCATCC18179351ATTCGCCGAGACTGAAAGCTCAGCCTCAGGTTGCTTTGCCAGTACCTGTT
Malus x robusta genome assembly, chromosome: 14.
OY720338.1:17203030-17203049
ATCATGCACGGAGACATCATGGTGTCATCC17203030ATTCGCCGAGACTGAAAGCTGAGCCTAAGGTTGCTTTGCCATAACCTGTT
Pyrus communis genome assembly, chromosome: 13.
OY757080.1:15480419-15480438
ATCATGCACGGAGACATCATGATGTCATCC15480419ATTCGCCGAGACTGAAAGCTCAGCCTAAGGTTGCTTTGCCAGTACCTGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGCTTTCAGTCTCGGCGAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCTTTCAGTCTCGGCGAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.338 | 0.329 | search_plus_done; http://172.18.8.135:50400/match?q=AGCTTTCAGTCTCGGCGAAT&k=0&no_gap=0&offset=0&limit=50
0.642 | 0.304 | search_minus_done; http://172.18.8.135:50400/match?q=ATTCGCCGAGACTGAAAGCT&k=0&no_gap=0&offset=0&limit=24
0.654 | 0.012 | cgi_end;

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