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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:10:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:6617836-6617855
TGACAACCGACTAGACTCAAAATACTCTGA6617836AGCTTTGAATAACTTCCAGGTAAACCGATCAATTCTTAACCATACTCGTG
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:6834777-6834796
TGACAACCGACTAGACTCAAAATACTCTGA6834777AGCTTTGAATAACTTCCAGGTAAACAGATCAATTCTTAACCATACTCGTG
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:6264604-6264623
TGACAACCGACTAGACTCAAAATACTCTGA6264604AGCTTTGAATAACTTCCAGGTAAACCGATCAATTCTTAACCATACTCGTG
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:6773280-6773299
TGACAACCGACTAGACTCAAAATACTCTGA6773280AGCTTTGAATAACTTCCAGGTAAACCGATCAATTCTTAACCATACTCGTG
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:6541357-6541376
TGACAACCGACTAGACTCAAAATACTCTGA6541357AGCTTTGAATAACTTCCAGGTAAACAGATCAATTCTTAACCATACTCGTG
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:5341332-5341351
TGACAACCGACTAGACTCAAAATACTCTGA5341332AGCTTTGAATAACTTCCAGGTAAACAGATCAATTCTTAACCATACTCGTG
Primula vulgaris genome assembly, chromosome: 4.
OY987215.1:11770029-11770048
CCATCCTGATGGCCTCAAACCCTTTTCAGC11770029AGCTTTGAATAACTTCCAGGGTTAATTAAGATGTCACGCGTTCAAAACTT
Gonocerus acuteangulatus genome assembly, chromosome: 6.
OX328128.1:55624994-55625013
TTTCCAGTCCGCACAGGTCCACTTCCGGCC55624994AGCTTTGAATAACTTCCAGGGGCTCGAAATTTTTAGAGTTCCATACCCCG
Silurus aristotelis genome assembly, chromosome: 25.
OX327777.1:4598448-4598467
TATATATTAAACGCAACAAAGAAAACTGTA4598448CCTGGAAGTTATTCAAAGCTGCGCTCCAATGCTTTTTAATGTTTGTATAT
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:39986424-39986443
CACGAGTATGGTTACGAATTGATCTGTTTA39986424CCTGGAAGTTATTCAAAGCTTCAGAGTATTTTGAGTCTAGTCGGTTGTCA
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:36684644-36684663
CACGAGTATGGTTAAGAATTGATCTGTTTA36684644CCTGGAAGTTATTCAAAGCTTCAGAGTATTTTGAGTCTAGTCGGTTGTCA
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:40284311-40284330
CACGAGTATGGTTACGAATTGATCTGTTTA40284311CCTGGAAGTTATTCAAAGCTTCAGAGTATTTTGAGTCTAGTCGGTTGTCA
Malus domestica genome assembly, chromosome: 5.
OU696681.1:39575551-39575570
CACGAGTATGGTTACGAATTGATCTGTTTA39575551CCTGGAAGTTATTCAAAGCTTCAGAGTATTTTGAGTCTAGTCGGTTGTCA
Malus domestica genome assembly, chromosome: 5.
OU744546.1:39144379-39144398
CACGAGTATGGTTACGAATTGATCTGTTTA39144379CCTGGAAGTTATTCAAAGCTTCAGAGTATTTTGAGTCTAGTCGGTTGTCA
Malus domestica genome assembly, chromosome: 5.
OU744957.1:39605399-39605418
CACGAGTATGGTTAAGAATTGATCTGTTTA39605399CCTGGAAGTTATTCAAAGCTTCAGAGTATTTTGAGTCTAGTCGGTTGTCA
Malus domestica genome assembly, chromosome: 5.
OU744995.1:40440597-40440616
CACGAGTATGGTTACGAATTGATCTGTTTA40440597CCTGGAAGTTATTCAAAGCTTCAGAGTATTTTGAGTCTAGTCGGTTGTCA
Cryptosula pallasiana genome assembly, chromosome: 4.
OX183133.1:5871106-5871125
GCCCTAAATACTTGAAAATCGCTCCCCCAA5871106CCTGGAAGTTATTCAAAGCTGGGCGTTGTGAATTTGTTTTTGTCAAATTG
Dioctria linearis genome assembly, chromosome: 5.
OZ005744.1:100363415-100363434
ACTCTTATTTTGTGCATTTATCAATGACTT100363415CCTGGAAGTTATTCAAAGCTAGAGCATTCAGATGTATGCAGATGACGTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGCTTTGAATAACTTCCAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGCTTTGAATAACTTCCAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.180 | 0.171 | search_plus_done; http://172.18.8.135:50400/match?q=AGCTTTGAATAACTTCCAGG&k=0&no_gap=0&offset=0&limit=50
0.282 | 0.102 | search_minus_done; http://172.18.8.135:50400/match?q=CCTGGAAGTTATTCAAAGCT&k=0&no_gap=0&offset=0&limit=42
0.289 | 0.007 | cgi_end;

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