GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Limanda limanda genome assembly, chromosome: 12.
OY755003.1:18466673-18466692

TCTTTTGTGTCTCAGAGGTTTCACAGGTGG18466673AGGAAAGATGGAGGAGACGAAGGTGGAGAAAGACGACGTGATCAACATCT

AGENAE Rainbow trout multi-tissues library (tcce) clone tcba0014.h.23, 3prim end (3 primer).
CU072052.1:472-491

AAAGATGGAGGAGACGAAAGAACGTTTTTC472AGGAAAGATGGAGGAGACGAAAGAACGTTTCTCTGGAAAGATGGAGGAGA

TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_2291.
FX700381.1:67-86

TCCGAAAAGAACGGAGGAAAGGACGAAAGA67AGGAAAGATGGAGGAGACGAAGCCATTGGTAGGGAACCATCCCCAGCAGC

TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_10813.
FX734806.1:78-97

TCCGAAAAGAACGGAGGAAAGGACGAAAGA78AGGAAAGATGGAGGAGACGAAGCCATTGGTAGGGAACCATCCCCAGCAGC

BOHKI18TR BOHK Brassica oleracea genomic clone BOHKI18, genomic survey sequence.
BH542348.1:328-347

CCTAGAGATCCGGAAAGAACGGAGGAAAGA328AGGAAAGATGGAGGAGACGAAGCCATTGGCAGGGAATCATCCCCAGCAGC

BONBU82TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONBU82, genomic survey sequence.
BZ440697.1:388-407

CCTAGAGATCCGGAAAGAACGGAGGAAAGA388AGGAAAGATGGAGGAGACGAAGCCATTGGCAGGGAATCATCCCCAGCAGC

BOT01-45F10TR BOT01 Brassica oleracea genomic clone BOT01-45F10, genomic survey sequence.
FI704218.1:181-200

CCTAGAGATCCGGAAAGAACGGAGGAAAGA181AGGAAAGATGGAGGAGACGAAGCCATTGGCAGGGAATCATCCCCAGCAGC

Brassica napus genome assembly, chromosome: A10.
HG994364.1:15711552-15711571

TCCGAAAAGAACGGAGGAAAGGACGAAAGA15711552AGGAAAGATGGAGGAGACGAAGCCATTGGTAGGGAACCATCCCCAGCAAC

Brassica napus genome assembly, chromosome: C09.
HG994373.1:57016110-57016129

CCTAGAGATCCGGAAAGAACGGAGGAAAGA57016110AGGAAAGATGGAGGAGACGAAGCCATTGGCAGGGAATCATCCCCAGCAGC

Brassica rapa genome, scaffold: A10.
LR031577.1:12628324-12628343

TCCGAAAAGAACGGAGGAAAGGACGAAAGA12628324AGGAAAGATGGAGGAGACGAAGCCATTGGTAGGGAACCATCCCCAGCAGC

Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:55164998-55165017

CCTAGAGATCCGGAAAGAACGGAGGAAAGA55164998AGGAAAGATGGAGGAGACGAAGCCATTGGCAGGGAATCATCCCCAGCAGC

Brassica rapa genome assembly, chromosome: A10.
LS974626.2:15384679-15384698

TCCGAAAAGAACGGAGGAAAGGACGAAAGA15384679AGGAAAGATGGAGGAGACGAAGCCATTGGTAGGGAACCATCCCCAGCAGC

Trididemnum clinides genome assembly, chromosome: 2.
OY776285.1:21783957-21783976

TCGTTAGAGAGAGACAGAGTTTGAGATGAA21783957AGGAAAGATGGAGGAGACGACAGGGTGGCGAGGACAGAACGAGAGTCAAA

Trididemnum clinides genome assembly, chromosome: 4.
OY776287.1:33073642-33073661

TGCCAGATCTGCCACAGAGATTGAGGTAAG33073642AGGAAAGATGGAGGAGACGACAGAACGAAAGTCAGATTGAAGGAGAAGAG

Trididemnum clinides genome assembly, chromosome: 5.
OY776288.1:13880959-13880978

ATGACAGTTTCTGTCAGAGTTTGAGGTAAA13880959AGGAAAGATGGAGGAGACGACAGAGTGGCGAGGACAAAACGGGAGTCAAA

Trididemnum clinides genome assembly, chromosome: 6.
OY776289.1:29061903-29061922

TGTCAGATCTGCCACAAAGTTTGAGATAAG29061903AGGAAAGATGGAGGAGACGACAGGGTGGTGAGGACAGAACGAGAGTCAGA

Trididemnum clinides genome assembly, chromosome: 7.
OY776290.1:3193387-3193406

TGCCAGATCTGCCACAGAGTTTGAGTTAAG3193387AGGAAAGATGGAGGAGACGACAGAGCGGCGAGGATAGAACGAGAGTCAGA

Trididemnum clinides genome assembly, chromosome: 7.
OY776290.1:9477317-9477336

AAAACAGTTCCTGCCAGAGATTGAGATAAA9477317AGGAAAGATGGAGGAGACGACAGAGTGCCGAGGAAAGAGCGAGAATCAGA

Trididemnum clinides genome assembly, chromosome: 7.
OY776290.1:26622294-26622313

TGCCAGATCTGCCACAGAGTTTGAGATAAG26622294AGGAAAGATGGAGGAGACGACAGGGTGGTGAGGACAGAACCAGAGTCAGA

Trididemnum clinides genome assembly, chromosome: 7.
OY776290.1:26648588-26648607

TGCCAGATCTGTCACAGAGTTTGAGATAAG26648588AGGAAAGATGGAGGAGACGACAGGGTGGTGAGGACAGAACCAGAGTCAGA

Trididemnum clinides genome assembly, chromosome: 10.
OY776293.1:29283732-29283751

TGCCAGATCTGCCAGAGAGTTTGTGGTAAA29283732AGGAAAGATGGAGGAGACGACAGGGTGGTGAGGACAGAACTAAAGTCAGA

Trididemnum clinides genome assembly, chromosome: 10.
OY776293.1:36815612-36815631

TGCCAGATCTGCCACAGAGTTTGAGATAAG36815612AGGAAAGATGGAGGAGACGACAGAACGAGAGTCAGACAAGAGAAGAGAAA

Trididemnum clinides genome assembly, chromosome: 13.
OY776296.1:3484438-3484457

TGCCAGATGTGCCAAAGAGTTTGAGGTAAA3484438AGGAAAGATGGAGGAGACGACACGGGGCGAGGACAGAGCAAGAGTCAAAA

Trididemnum clinides genome assembly, chromosome: 14.
OY776297.1:28288479-28288498

GACAGTTCCTGCCAAAGAGTTTGAGGTAAA28288479AGGAAAGATGGAGGAGACGACAGGGAGGCGAGGACAGAGCGAGAATCAGA

Trididemnum clinides genome assembly, chromosome: 16.
OY776299.1:6831924-6831943

TGCCAGATCTGCCACACAGTTTGAGATAAG6831924AGGAAAGATGGAGGAGACGACAGGATGGCGAGGACAGAACGAGAGTCAGA

Andrena marginata genome assembly, chromosome: 2.
OZ010660.1:51417032-51417051

GCGGAGCAGAAGTGTTTGCAGAGGCGAAGA51417032AGGAAAGATGGAGGAGACGATATCAATTTGTGGCGACGTGAATTTAATTT

Lipophrys pholis genome assembly, chromosome: 19.
OY726551.1:9065117-9065136

TTTCCCGTGGCCTCCCCGTCTGCCTCACCC9065117TCGTCTCCTCCATCTTTCCTCCTCCCGCTTGTATGCTAGCATTGCCTCTG

Brassica napus cultivar Xiang5A chromosome 5.
CP123880.1:5049305-5049324

GTTGCTGGGGATGATTCCCTACCAATGGCT5049305TCGTCTCCTCCATCTTTCCTTCTTTCGTCCTTTCCTCCGTTCTTTTCGGA

Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:8410591-8410610

GCTGCTGGGGATGATTCCCTGCCAATGGCT8410591TCGTCTCCTCCATCTTTCCTTCTTTCCTCCGTTCTTTCCGGATCTCTAGG

Lasioglossum lativentre genome assembly, chromosome: 2.
OU744356.1:27320212-27320231

GAGTTTGCAGAAATTCTTTCTTCCATTTTT27320212TCGTCTCCTCCATCTTTCCTTTTTTTCTTTTTCTCTGAATCCTTACCGGG

Ceriagrion tenellum genome assembly, chromosome: 4.
OY720635.1:1023202-1023221

ATGAGAGAAGAGAACGTCGTCGTCGTCGTG1023202TCGTCTCCTCCATCTTTCCTCGACTCGGGTGGTCGATCGACCGACCGACC

Trididemnum clinides genome assembly, chromosome: 2.
OY776285.1:53273979-53273998

ACTACTTACGACTTTTTCGGGGTCACCCTG53273979TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTAGCA

Trididemnum clinides genome assembly, chromosome: 3.
OY776286.1:37556426-37556445

TCTGACTCTCATTCTGTCCTTGCCGCCCTG37556426TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGCA

Trididemnum clinides genome assembly, chromosome: 5.
OY776288.1:13893294-13893313

TCTGACTCCCGTTTTGTCCTCGCCACTCTG13893294TCGTCTCCTCCATCTTTCCTTTTACCTCAAACTCTGACAGAAACTGTCAT

Trididemnum clinides genome assembly, chromosome: 6.
OY776289.1:25651870-25651889

TCTGACTCTCGTTCTGTCCTCGCCACCCTG25651870TCGTCTCCTCCATCTTTCCTTTTGTCTCAAACTCTGTGGCAGATCTGGCA

Trididemnum clinides genome assembly, chromosome: 6.
OY776289.1:28971396-28971415

TCAGACTCTCACTCTGTCCTCGCCACCCTG28971396TCGTCTCCTCCATCTTTCCTTTTACCTCAATCTGTCTCTGGCAGATCTGG

Trididemnum clinides genome assembly, chromosome: 7.
OY776290.1:26636379-26636398

TCTGACTCTGGTTCTGTCCTCACCACCCTG26636379TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGCA

Trididemnum clinides genome assembly, chromosome: 9.
OY776292.1:12963885-12963904

TCTGACTCTCGTTGTGTCCACGCCATCCTG12963885TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGCA

Trididemnum clinides genome assembly, chromosome: 10.
OY776293.1:7295638-7295657

TCTGACTCTCGTTCTGTCCTCGCCACCCTG7295638TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGTA

Trididemnum clinides genome assembly, chromosome: 12.
OY776295.1:11936820-11936839

TCTGACTCTCGTTCTGTCCTCGCCACCCTG11936820TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGCA

Trididemnum clinides genome assembly, chromosome: 12.
OY776295.1:12016025-12016044

TCTGGCTCTCGTTCTGTCCTCGCCACCCTG12016025TCGTCTCCTCCATCTTTCCTCTTATCTCAAACTCTGTGGCAGATCTGGCA

Trididemnum clinides genome assembly, chromosome: 12.
OY776295.1:26662705-26662724

TTTGACTCTCGTTCTGTCCTCGCCACCCTG26662705TCGTCTCCTCCATCTTTCCTTTTACGTCAATCTCCCTGGCAGATCTGGCA

Trididemnum clinides genome assembly, chromosome: 13.
OY776296.1:6716605-6716624

CTCTCCTCCTACTATCTGACTCTCGTTCTG6716605TCGTCTCCTCCATCTTTCCTTTTATCTCAAACTCTGTGGCAGATCTGGCA

Trididemnum clinides genome assembly, chromosome: 13.
OY776296.1:6723299-6723318

CTCTCCTCCTACTATCTGACTCTCGTTCTG6723299TCGTCTCCTCCATCTTTCCTTTTATCTCAAACTCTGTGGCCGATCTGGCA

Trididemnum clinides genome assembly, chromosome: 13.
OY776296.1:6747651-6747670

CTCTTCTCCTACTATCTGACTCTCGTTCTG6747651TCGTCTCCTCCATCTTTCCTTTTATCTCAAACTCTGTGGCAGATCTGGCA

Trididemnum clinides genome assembly, chromosome: 16.
OY776299.1:12003478-12003497

TCTGACTCTCGTTCTGTCCTCGCCACCCTG12003478TCGTCTCCTCCATCTTTCCTCTTATCCAAAAATTTGTGGCAGATCTGGCA

Trididemnum clinides genome assembly, chromosome: 19.
OY776302.1:6800387-6800406

CTCTTCTCCTATCTGATTCTCGCTACTCCT6800387TCGTCTCCTCCATCTTTCCTTTGCCTTAATGTATGGCAGGAACTGTCTTC

Trididemnum clinides genome assembly, chromosome: 19.
OY776302.1:21738973-21738992

TCTGACTCTCGTTCTGTCCTCGCCACCCTG21738973TCGTCTCCTCCATCTTTCCTGTTATCTCAAACTCTGTGGCAGATCTGGCA

Data Export:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.216 | 0.208 | search_plus_done; http://172.18.8.135:50400/match?q=AGGAAAGATGGAGGAGACGA&k=0&no_gap=0&offset=0&limit=50
0.348 | 0.132 | search_minus_done; http://172.18.8.135:50400/match?q=TCGTCTCCTCCATCTTTCCT&k=0&no_gap=0&offset=0&limit=24
0.364 | 0.015 | cgi_end;

Summary:

Results:

Data Export:

Debug Info: