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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-20 08:10:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

mte1-26A15FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR305933.1:711-735
AGAGGTGGGAGACCTGCAAAAATTCAGAAA711AGGAAATTCTACCAAAGATTCTGAGGTTTGACATTTGGAAAACTGACTATATATT
Medicago truncatula chromosome 7 BAC clone mth2-58i19, complete sequence.
AC186135.3:35512-35536
AGAGGTGGGAGACCTGCAAAAATTCAGAAA35512AGGAAATTCTACCAAAGATTCTGAGGTTTGACATTTGGAAAACTGACTATATATT
mte1-10J13FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR294665.1:440-464
AATATATAGTCAGTTTTCCAAATGTCAAAC440CTCAGAATCTTTGGTAGAATTTCCTTTTCTGAATTTTTGCAGGTCTCCCACCTCT
mth2-155F2FM2 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR486397.1:362-386
AATATATAGTCAGTTTTCCAAATGTCAAAC362CTCAGAATCTTTGGTAGAATTTCCTTTTCTGAATTTTTGCAGGTCTCCCACCTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGAAATTCTACCAAAGATTCTGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGAAATTCTACCAAAGATTCTGAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.399 | 0.390 | search_plus_done; http://172.18.8.135:50400/match?q=AGGAAATTCTACCAAAGATTCTGAG&k=0&no_gap=0&offset=0&limit=50
0.523 | 0.124 | search_minus_done; http://172.18.8.135:50400/match?q=CTCAGAATCTTTGGTAGAATTTCCT&k=0&no_gap=0&offset=0&limit=48
0.524 | 0.001 | cgi_end;

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