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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 13:03:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-7512 Pericarp Coffea canephora cDNA clone cccp5b9 5', mRNA sequence.
DV672087.1:16-40
GCTAGCTATGGAGAC16AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT
CGN-10194 Pericarp Coffea canephora cDNA clone cccp10d2 5', mRNA sequence.
DV673913.1:16-40
GCTAGCTATGGAGAC16AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT
CGN-54380 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w16b10 5', mRNA sequence.
DV706836.1:132-156
GTAACTAGCTAGCTAGCTAGCTATGGAGAC132AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT
CGN-59110 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w29b13 5', mRNA sequence.
DV710550.1:132-156
GTAACTAGCTAGCTAGCTAGCTATGGAGAC132AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT
TransId-80475 CACAT36FLBUD Coffea arabica cDNA clone CACAT36FLBUD_Q3_06_67C09.F similar to Symbol: None | lactoylglutathione lyase family protein / glyoxalase I family protein, contains glyoxalase fam
GR983019.1:134-158
GAAGGTAACTAGCTAGCTAGCTATGGAGAC134AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT
TransId-79450 CACAT36FLBUD Coffea arabica cDNA clone CACAT36FLBUD_Q2_04_E20_309.F similar to Symbol: None | lactoylglutathione lyase family protein / glyoxalase I family protein, contains glyoxalase f
GR983464.1:138-162
GTAACTAGCTAGCTAGCTAGCTATGGAGAC138AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT
TransId-95949 CACAT36MER Coffea arabica cDNA clone CACAT36MER_Q3_08_08H01.F similar to Symbol: None | lactoylglutathione lyase family protein / glyoxalase I family protein, contains glyoxalase family
GR989211.1:137-161
GTAACTAGCTAGCTAGCTAGCTATGGAGAC137AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT
CA00-XX-FR1-065-D06-AB.F Coffea arabica FR1 Coffea arabica cDNA clone CA00-XX-FR1-065-D06-AB, mRNA sequence.
GT714855.1:75-99
GTAACTAGCTAGCTAGCTAGCTATGGAGAC75AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT
CA00-XX-BP1-115-H03-CB.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-115-H03-CB, mRNA sequence.
GT722398.1:102-126
GTAACTAGCTAGCTAGCTAGCTATGGAGAC102AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT
CA00-XX-RT8-028-H11-QH.F Coffea arabica RT8 Coffea arabica cDNA clone CA00-XX-RT8-028-H11-QH, mRNA sequence.
GT728747.1:130-154
GTAACTAGCTAGCTAGCTAGCTATGGAGAC130AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT
CA00-XX-RT8-058-D06-EZ.F Coffea arabica RT8 Coffea arabica cDNA clone CA00-XX-RT8-058-D06-EZ, mRNA sequence.
GT728748.1:108-132
GTAACTAGCTAGCTAGCTAGCTATGGAGAC108AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT
Coffea canephora clone seq124 note CC-CxR-CWSB-fSSH-seq124 metallothiol transferase FosB-like mRNA, 5' UTR and partial cds.
MH105063.1:142-166
GTAACCAGCTAGCTAGCTAGCTATGGAGAC142AGGAATAATGGAGGAGACGTTGTTGAGTCGTTCATCTTCATCATCATCGATACAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGAATAATGGAGGAGACGTTGTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGAATAATGGAGGAGACGTTGTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.882 | 0.873 | search_plus_done; http://172.18.8.135:50400/match?q=AGGAATAATGGAGGAGACGTTGTTG&k=0&no_gap=0&offset=0&limit=50
0.999 | 0.117 | search_minus_done; http://172.18.8.135:50400/match?q=CAACAACGTCTCCTCCATTATTCCT&k=0&no_gap=0&offset=0&limit=38
0.999 | 0.000 | cgi_end;

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