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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 23:50:16, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cucumis melo subsp. melo EST, clone PSI_31-B12-M13R.
AM720201.2:79-98
TTCATGGGAAATTAGACCACATAACCTTGG79AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTTTCTTTTTCT
Cucumis melo subsp. melo EST, clone HS_32-H08-M13R.
AM724258.2:55-74
TTCATGGGAAATTAGACCACATAACCTTGG55AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTTTCTTTTTCT
Cucumis melo subsp. agrestis EST, clone A_31-B02-M13R.
AM728345.2:297-316
TTCATGGGAAATTAGACCACATAACCTTGG297AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTTTCTTTTTCT
Citrullus lanatus cultivar Allsugar chromosome 2.
CP155010.1:1437669-1437688
TTCATGGGAAATTAGACCACATAACCTTGG1437669AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus cultivar Charleston Gray chromosome 2.
CP155143.1:1458323-1458342
TTCATGGGAAATTAGACCACATAACCTTGG1458323AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus cultivar Calhoun Gray chromosome 2.
CP155154.1:1442923-1442942
TTCATGGGAAATTAGACCACATAACCTTGG1442923AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus cultivar PKR6 chromosome 2.
CP155165.1:1449037-1449056
TTCATGGGAAATTAGACCACATAACCTTGG1449037AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus cultivar Sugarlee chromosome 2.
CP155176.1:1440445-1440464
TTCATGGGAAATTAGACCACATAACCTTGG1440445AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus cultivar ShiHongNo2 chromosome 2.
CP155187.1:1447019-1447038
TTCATGGGAAATTAGACCACATAACCTTGG1447019AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus cultivar PI 288522 chromosome 2.
CP155198.1:1452775-1452794
TTCATGGGAAATTAGACCACATAACCTTGG1452775AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus cultivar DaBanHongZiGua chromosome 2.
CP155209.1:1452597-1452616
TTCATGGGAAATTAGACCACATAACCTTGG1452597AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus cultivar PI 381740 chromosome 2.
CP155220.1:1460048-1460067
TTCATGGGAAATTAGACCACATAACCTTGG1460048AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus cultivar SanBaiGua chromosome 2.
CP155231.1:1436103-1436122
TTCATGGGAAATTAGACCACATAACCTTGG1436103AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus cultivar PI 254622 chromosome 2.
CP155242.1:1487351-1487370
TTCATGGGAAATTAGACCACATAACCTTGG1487351AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus cultivar HeiShanRen chromosome 2.
CP155253.1:1448778-1448797
TTCATGGGAAATTAGACCACATAACCTTGG1448778AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus amarus cultivar PI 296341-FR chromosome 2.
CP155264.1:2134616-2134635
TTCATGGGAAATTAGACCACATAACCTTGG2134616AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus amarus cultivar PI 189225 chromosome 2.
CP155275.1:2261868-2261887
TTCATGGGAAATTAGACCACATAACCTTGG2261868AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus amarus cultivar RCAT 055816 chromosome 2.
CP155286.1:2587806-2587825
TTCATGGGAAATTAGACCACATAACCTTGG2587806AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus amarus cultivar PI 271769 chromosome 2.
CP155297.1:2141805-2141824
TTCATGGGAAATTAGACCACATAACCTTGG2141805AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus subsp. mucosospermus cultivar PI 595203 chromosome 2.
CP155308.1:1424259-1424278
TTCATGGGAAATTAGACCACATAACCTTGG1424259AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus amarus cultivar PI 482276 chromosome 2.
CP155319.1:2533658-2533677
TTCATGGGAAATTAGACCACATAACCTTGG2533658AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus lanatus subsp. mucosospermus cultivar PI 532732 chromosome 2.
CP155330.1:1470836-1470855
TTCATGGGAAATTAGACCACATAACCTTGG1470836AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus colocynthis cultivar PI 537300 chromosome 2.
CP155341.1:1426225-1426244
TTCATGGGAAATTAGACCACATAACCTTGG1426225AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus colocynthis cultivar PI 525081 chromosome 2.
CP155352.1:1469963-1469982
TTCATGGGAAATTATACCACATAACCTTGG1469963AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus naudinianus cultivar PI 596694M chromosome 2.
CP155363.1:2164812-2164831
TTCATGGGAAATTAGACCACATAACCTTGG2164812AGGACAGCGGAGCTTTTCTTTACCTGCATGAATCTTCTCAGAGTGGACTT
Citrullus colocynthis cultivar PI 652554 chromosome 2.
CP155374.1:1431283-1431302
TTCATGGGAAATTAGACCACATAACCTTGG1431283AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus colocynthis cultivar PI 632755 chromosome 2.
CP155385.1:1454583-1454602
TTCATGGGAAATTATACCACATAACCTTGG1454583AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus rehmii cultivar PI 670011 chromosome 2.
CP155396.1:1930142-1930161
TTCATGGGAAATTAGACCACATAACCTTGG1930142AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTTAATCT
Citrullus ecirrhosus cultivar PI 673135 chromosome 2.
CP155407.1:1457732-1457751
TTCATGGGAAATTAGACCACATAACCTTGG1457732AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTCTTTAATCTT
Cucumis melo genomic scaffold, anchoredscaffold00034.
LN681792.1:2684753-2684772
TTCATGGGAAATTAGACCACATAACCTTGG2684753AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTTTCTTTTTCT
Cucumis melo genomic chromosome, chr_1.
LN713255.1:2684753-2684772
TTCATGGGAAATTAGACCACATAACCTTGG2684753AGGACAGCGGAGCTTTTCTTTACCTGCATGATTCTTCTTTTTCTTTTTCT
Methylomicrobium sp. wino1 chromosome, complete genome.
CP024202.1:2018260-2018279
TTCGGTCGTTATCAACAGCGTGTTTTGCTT2018260AGGACAGCGGAGCTTTTCTTCGCGTGACGAAAAACGTTCGCCGCCGACTT
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_24793, mRNA sequence.
JW942655.1:372-391
AAAGGAAAAGAAAGAAAAATCATGCAGGTA372AAGAAAAGCTCCGCTGTCCTCCAAGGTTATGTGGTCTAATTTCCCATGAA
Citrullus colocynthis genome assembly, chromosome: 2.
OZ021736.1:35338038-35338057
AGATTAAAAGAAAGAAGAATCATGCAGGTA35338038AAGAAAAGCTCCGCTGTCCTCCAAGGTTATGTGGTCTAATTTCCCATGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGACAGCGGAGCTTTTCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGACAGCGGAGCTTTTCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.130 | 0.121 | search_plus_done; http://172.18.8.135:50800/match?q=AGGACAGCGGAGCTTTTCTT&k=0&no_gap=0&offset=0&limit=50
0.186 | 0.057 | search_minus_done; http://172.18.8.135:50800/match?q=AAGAAAAGCTCCGCTGTCCT&k=0&no_gap=0&offset=0&limit=18
0.187 | 0.001 | cgi_end;

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