GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 06:31:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:19765961-19765981
AGATGGAGGTGAAGTTGTAGGTCCACCAGC19765961AGGAGGGGTGCTGACAGAAGGAGGAGATGAAGCCTTAGGTCCACCAGCTGG
Trifolium repens mRNA, clone: WCC02l16_062, unspecified EST.
FY455107.1:457-477
CCAGCTGGTAGACCTAAAGCTTCTTCTCCC457CCTTCTGTCAGCACCCCTCCTGCTGGTGGACCTACAACTTCACCTCCATCT
Trifolium repens mRNA, clone: WCC05b17_066, unspecified EST.
FY455747.1:555-575
CCAGCTGGTGGACCTAAGGCTTCATCTCCT555CCTTCTGTCAGCACCCCTCCTGCTGGTGGACCTACAACTTCACCTCCATCT
Trifolium repens mRNA, clone: WCC22b19_002, unspecified EST.
FY461696.1:535-555
CCAGCTGGTGGACCTAAGGCTTCATCTCCT535CCTTCTGTCAGCACCCCTCCTGCTGGTGGACCTACAACTTCACCTCCATCT
Trifolium repens mRNA, clone: WCC25k12_093, unspecified EST.
FY462973.1:427-447
CCAGCTGGTGGACCTAAGGCTTCATCTCCT427CCTTCTGTCAGCACCCCTCCTGCTGGTGGACCTACAACTTCACCTCCATCT
Trifolium repens mRNA, clone: WCC27k02_029, unspecified EST.
FY463666.1:453-473
CCAGCTGGTGGACCTAAAGCTTCTTCTCCC453CCTTCTGTCAGCACCCCTCCTGCTGGTGGACCTACAACTTCACCTCCATCT
Trifolium repens mRNA, clone: WCC39g13_011, unspecified EST.
FY467884.1:453-473
CCAGCTGGTGGACCTAAAGCTTCTTCTCCC453CCTTCTGTCAGCACCCCTCCTGCTGGTGGACCTACAACTTCACCTCCATCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGGAGGGGTGCTGACAGAAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGAGGGGTGCTGACAGAAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.101 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=AGGAGGGGTGCTGACAGAAGG&k=0&no_gap=0&offset=0&limit=50
0.827 | 0.726 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCTGTCAGCACCCCTCCT&k=0&no_gap=0&offset=0&limit=49
0.831 | 0.004 | cgi_end;

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