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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-24 10:30:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Pv020B_M13F_F11.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE696385.1:154-173
GCTAAGGCTTTTATTCTGTATGAGCACAAA154AGGATGGAAATGGCTAGGCTCATGTCAACAAGGGGTGCCTGAACTTCTGT
MOOF520TR MOO Vigna unguiculata cDNA 3', mRNA sequence.
FF395369.1:295-314
GCTGATGCCTTTATTCAGTATGAGCACAAT295AGGATGGAAATGGCTAGGCTCATGTCAACAAGGGGTGTCTGAACTTCTGT
MOOF520TF MOO Vigna unguiculata cDNA 5', mRNA sequence.
FF401980.1:295-314
GCTGATGCCTTTATTCAGTATGAGCACAAT295AGGATGGAAATGGCTAGGCTCATGTCAACAAGGGGTGTCTGAACTTCTGT
vsu-ars_017958_LI10Contig_15105 VSU-ARS-L10 Phaseolus acutifolius cDNA, mRNA sequence.
HO792925.1:234-253
GCTGAGGCTTTTATTCTGTATGAGCACAAG234AGGATGGAAATGGCTAGGCTCATGTCAACAAGGGGTGCCTGAACTTCTGT
Vigna angularis mRNA, clone: VES07B11.
HX944756.1:257-276
GCTGATGCCTTTATTCTGTATGAGCACAAT257AGGATGGAAATGGCTAGGCTCATGTCAACAAGGGATGCTTGAACTTCTGT
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:7702140-7702159
GCTGATGCCTTTATTCTGTATGAGCACAAT7702140AGGATGGAAATGGCTAGGCTCATGTCAACAAGGGATGCTTGAACTTCTGT
Sphenostylis stenocarpa genome assembly, chromosome: 3.
OY731400.1:18404602-18404621
GCTGATGCTTTTATTCAGCATGAGCACAAG18404602AGGATGGAAATGGCTAGGCTCATGTCTCAAAGGGGTGCTTGAATCTCTGT
IvAg3p_19356 Aphis gossypii cDNA Libraries Aphis gossypii cDNA, mRNA sequence.
GW513033.1:89-108
AATGGCTCTGCTGGTCGGTGTACAGAACCA89AGCCTAGCCATTTCCATCCTGATCACTGACAGTCCATCGTCGCTTGGCCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGATGGAAATGGCTAGGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGATGGAAATGGCTAGGCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.776 | 0.767 | search_plus_done; http://172.18.8.135:50400/match?q=AGGATGGAAATGGCTAGGCT&k=0&no_gap=0&offset=0&limit=50
0.987 | 0.210 | search_minus_done; http://172.18.8.135:50400/match?q=AGCCTAGCCATTTCCATCCT&k=0&no_gap=0&offset=0&limit=43
0.987 | 0.001 | cgi_end;

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