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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:00:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:751601424-751601443
TTCTGTACAACATAATGTATATGTCTAAAT751601424AGGATTCTAGAGAAAATGGATGGATGGAGAATGTTGGTGGTGGAACAAGG
Calendula officinalis genome assembly, chromosome: 3.
OY970822.1:87494025-87494044
TTGAAATATGCAGCTGAACCGGTAATCAGG87494025AGGATTCTAGAGAAAATGGAGTCGCAGGTCAGATGCCCTTAAAAACCCTA
2_Tsi_b3v08.
OC041608.1:1098-1117
ACTGGGCTTTCCGAGAGTTACTAAAGATCT1098AGGATTCTAGAGAAAATGGATAACTAGGATTACCTGAATCCTTTCTGATA
Gonocerus acuteangulatus genome assembly, chromosome: 6.
OX328128.1:82010661-82010680
TATAAATGAAAACTATCAATACAAAATAAG82010661AGGATTCTAGAGAAAATGGAAACTTCCAAGTATGACGCATAAAAAGCTAA
Maratus michaelseni genome assembly, chromosome: 8.
OZ007594.1:250142422-250142441
CTTTAAATCTCGAAAATATATTGTTTTCTA250142422AGGATTCTAGAGAAAATGGAATGCTTTTTGGAAGCATGGGTAACTTGAAA
2_Tcm_b3v08.
OE235402.1:316-335
TATCAGAAAGGATTCAGGTAATCCTAGTTA316TCCATTTTCTCTAGAATCCTAGATCTTTAGTAACTCTCGGAAAGCCCAGT
Eupithecia subfuscata genome assembly, chromosome: 1.
OY751097.1:13994673-13994692
GTCTAGGAGATATAAATCTAATCCAGCTTT13994673TCCATTTTCTCTAGAATCCTTAGACCTCAATGGGTTACGTAGACCGGAAG
Maratus speciosus genome assembly, chromosome: X2.
OZ010796.1:523681238-523681257
AGAATTGTTTTGCACATGTACGAAAACTTT523681238TCCATTTTCTCTAGAATCCTTTATTAGCATAATCAATCATCAGAATCATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGATTCTAGAGAAAATGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGATTCTAGAGAAAATGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.231 | 0.222 | search_plus_done; http://172.18.8.135:50400/match?q=AGGATTCTAGAGAAAATGGA&k=0&no_gap=0&offset=0&limit=50
0.348 | 0.117 | search_minus_done; http://172.18.8.135:50400/match?q=TCCATTTTCTCTAGAATCCT&k=0&no_gap=0&offset=0&limit=45
0.350 | 0.002 | cgi_end;

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