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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:55:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus carolinensis genome assembly, chromosome: 9.
LR738598.1:52708954-52708970
TCCTCATATAATCTGCTTTATGGTGGTGGC52708954AGGCAGTTGTTAGACCCATGTGTACATGTTTGGTGTACAAGGAAGAA
Vespertilio murinus genome assembly, chromosome: X.
OZ004710.1:99926492-99926508
TGCCTCTACATATCCTCAAGCTATAGTACA99926492AGGCAGTTGTTAGACCCTTCAGAATTTCAGACATTGTGACTAAGACA
Microcaecilia unicolor genome assembly, chromosome: 1.
LR594632.1:272862022-272862038
TTGGAGCAATTGGTGGAATATGTGGATTTG272862022AGGCAGTTGTTAGACCCATTTCACTATAGATTTAGGAAGGAGTATAG
Sequence 28586 from patent US 8344211.
GZ662194.1:555-571
TGGGCCTTCACCCTGCCGTAAAGGGTTGCC555AGGCAGTTGTTAGACCCCGTTCCCTTTTGGGGGGAAGGGCCCATCCA
Ascochyta rabiei isolate Me14 chromosome 6.
CP095293.1:267301-267317
ATATTAGTAGAATTCCTTAGGGATAATTTT267301AGGCAGTTGTTAGACCCCTACTAGGTCTTCTATAGGTATGTTACTCC
Vicia faba genome assembly, chromosome: 2.
OX451737.1:1443451969-1443451985
GAATTTTCTCTCCAGAAATTGCCCCCCCAA1443451969AGGCAGTTGTTAGACCCGTGGCTACTCCGAAGGTTACCTCCATACCA
Citrus sinensis genome assembly, chromosome: 7.
OY754324.1:28678974-28678990
TAAAGGAGTCAAATATCACCATACTTAATA28678974AGGCAGTTGTTAGACCCCATTGAAGTAAACTGATTTCAGTATTGAAT
Lathyrus sativus genome assembly, chromosome: 1.
OZ012735.1:679884398-679884414
CCACCAAGCAGGGTGGTAAAGGGAAGAGCA679884398AGGCAGTTGTTAGACCCTTGAAGCCTAAAGGAGGCATAGCAAAGGAG
Aneurinibacillus sp. Ricciae_BoGa-3 chromosome, complete genome.
CP116887.1:2702794-2702810
CGTCAAATACCCGGGCACTACAGGATATCC2702794AGGCAGTTGTTAGACCCACTCAGTTACTTTAAACGCTGAGTGTGCCT
Luperina testacea genome assembly, chromosome: 4.
OV656759.1:15997699-15997715
AGTATTTTTGTTTTATTGTGTATTATTGGC15997699AGGCAGTTGTTAGACCCGAAGTTTTCCCAAAACAGACGCTGAAGAAT
Epinotia demarniana genome assembly, chromosome: 11.
OX244270.1:9071587-9071603
CACGCTGGACAAAAGCACCAATTTTTTTTC9071587AGGCAGTTGTTAGACCCATAGCTTTAAGTTTTTGATAGGAACCAACT
Eremobia ochroleuca genome assembly, chromosome: 4.
OX451388.1:16222282-16222298
GTAAGTATAATATAAGTATCCGCTATTGGC16222282AGGCAGTTGTTAGACCCAAAGTTTTCCCTAAACAGACGCTGAAGAAA
Colostygia pectinataria genome assembly, chromosome: 20.
OX596368.1:1727398-1727414
ACTAGACGCCGACACGTACTTTTACTGATT1727398AGGCAGTTGTTAGACCCTCGTGTTACCATGTTCTCGTCTGGTAGAAA
Plagodis pulveraria genome assembly, chromosome: 8.
OY982957.1:16657798-16657814
ATGCTGACTCTCTGGTAATAAAACCACCCC16657798AGGCAGTTGTTAGACCCTCACATAGAGACAAACGAACGCACAAAAGG
Sciurus vulgaris genome assembly, chromosome: 10.
LR738620.1:90862357-90862373
TTCTTCCTTGTACACCAAACATGTACACAT90862357GGGTCTAACAACTGCCTGCCACCACCATAAAGCAGATTATATGAGGA
Onychomys arenicola genome assembly, chromosome: 23.
OX460369.1:46790962-46790978
ATGTCCAGCCAGTAGCGTAATGGGGGGGGG46790962GGGTCTAACAACTGCCTCTTCCCCAAATAAGGCAGAGCGGGCAGGGG
Onychomys leucogaster genome assembly, chromosome: 15.
OX460385.1:76909093-76909109
GAAAGAGCTCTGAGGCTGCTCAGGGTCTTG76909093GGGTCTAACAACTGCCTCTCATCCCACCTCCCACAGCATAGGCAAGC
Onychomys leucogaster genome assembly, chromosome: 23.
OX460393.1:45737814-45737830
GGATCAATGTCCAGCCAGTAGCATAATGGG45737814GGGTCTAACAACTGCCTCTTCCCCAAATAAGGCAGAGCGGGCAGGGG
Onychomys leucogaster genome assembly, chromosome: 15.
OX460432.1:77224289-77224305
GAAAGAGCTCTGAGGCTGCTCAGGGTCTTG77224289GGGTCTAACAACTGCCTCTCATCCCACCTCCCACAGCATAGGCAAGC
Onychomys leucogaster genome assembly, chromosome: 23.
OX460440.1:45958998-45959014
GGATCAATGTCCAGCCAGTAGCATAATGGG45958998GGGTCTAACAACTGCCTCTTCCCCAAATAAGGCAGAGCGGGCAGGGG
Onychomys arenicola genome assembly, chromosome: 23.
OX460464.1:44497835-44497851
AATGTCCAGCCAGTAGCGTAATGGGGGGGG44497835GGGTCTAACAACTGCCTCTTCCCCAAATAAGGCAGAGCGGGCAGGGG
Sarcophilus harrisii genome assembly, chromosome: 6.
LR735559.1:32037302-32037318
CATAACAAGTACTTAAAAACAGTTCTAAGT32037302GGGTCTAACAACTGCCTCTAAGCATCTATATCTTTATATGTGTGTTT
Scleropages formosus genome assembly, chromosome: 14.
LR584079.1:13257885-13257901
ATTAGCTATGGGGAACCATGGAAAAGTAAT13257885GGGTCTAACAACTGCCTTTCCCTACCATAGCTACTGGGCATTTCTAA
Geotrypetes seraphini genome assembly, chromosome: 3.
LR699148.1:146614744-146614760
GCCCATGTTTTGACGTATAGTATGCATCAG146614744GGGTCTAACAACTGCCTACATGTAAAAATATGTAAAAATAAACAGAA
Erithacus rubecula genome assembly, chromosome: 2.
LR812104.1:57533643-57533659
TCAGATATTGCTCATTTCAGATCTTGTAAA57533643GGGTCTAACAACTGCCTATGGTTTGAGAATAAAGAAATTAAAAGACA
Rattus norvegicus clone CH230-101G18, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC097681.6:139759-139775
CAGTCCCACTTAGAAAGGTTCTGAGTCGTG139759GGGTCTAACAACTGCCTGTGATTCCAGTTCCAGGAGGTCTGACGCCC
Rattus norvegicus clone CH230-238J22, WORKING DRAFT SEQUENCE, 7 ordered pieces.
AC129341.5:163556-163572
CAGTCCCACTTAGAAAGGTTCTGAGTCGTG163556GGGTCTAACAACTGCCTGTGATTCCAGTTCCAGGAGGTCTGACGCCC
Saururus chinensis isolate CL-2023b chromosome 6.
CP141145.1:8232388-8232404
CATTCACCCCTTAGCCTATTCAGTGGCTAG8232388GGGTCTAACAACTGCCTAATTGCCAATTAAAACTAGGTATTGCCAAC
Citrus reshni microsatellite DNA, locus mCrCIR02G08.
FR692362.1:248-264
ATTCAATACTGAAATCAGTTTACTTCAATG248GGGTCTAACAACTGCCTTATTAAGTATGGTGATATTTGACTCTTTTA
Epirixanthes elongata voucher Suddee et al. 4779 mitochondrion, complete genome.
MG783394.1:55312-55328
ATTTCGTTAGACCAAGTCGGACAACTTAGA55312GGGTCTAACAACTGCCTATCTTCAAATTAACACACACCATCTGTTAG
Vicia faba genome assembly, chromosome: 4.
OX451739.1:922935630-922935646
CGGTATGGAAGTAACCTTTGGAGCAGCCAC922935630GGGTCTAACAACTGCCTTTGGGGGGGAAATTTCTGGAGAAAATATTC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460086.1:219492912-219492928
AAAAAAATCGTTAGACTTTTTAAACAAACA219492912GGGTCTAACAACTGCCTGTCCGAGAAGTTCTAACCTAATTTTAGTTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638781.1:232674165-232674181
AAAAAAATCGTTAGACTTTTTAAACAAACA232674165GGGTCTAACAACTGCCTGTCCGAGAAGTTCTAACCTAATTTTAGTTA
Eristalis tenax genome assembly, chromosome: 2.
HG993125.1:58467826-58467842
AAATTGTGGCTCCCATATCATAATGACAAT58467826GGGTCTAACAACTGCCTCCTGTCTTTGATCTTTGAGTCCAGACTGAG
Hermetia illucens genome assembly, chromosome: 2.
LR899010.1:162664426-162664442
CGTGAAATGAAGACCCAAGTGTCGTAAGTA162664426GGGTCTAACAACTGCCTTAGGGGTCGTCAGCAACTTTCAAAAAGTCG
Mesoligia furuncula genome assembly, chromosome: 10.
OU744800.1:10043382-10043398
ATTCTTCAGCGTCTGTTTAGGGAAAACTTC10043382GGGTCTAACAACTGCCTGCCAATAACGGATACTTATACTTATGTTAG
Sthenelais limicola genome assembly, chromosome: 2.
OW804095.1:22448777-22448793
CCTCCTGTCTGTACTTGTGAGCAGCGGTCT22448777GGGTCTAACAACTGCCTCACAGGCCTTCAGTTTAAATAGGATATTGT
Lumbricus rubellus genome assembly, chromosome: 14.
OX243824.1:8535437-8535453
ATATCAACAGCGTCTCCACTAGGCCTGGTG8535437GGGTCTAACAACTGCCTAGACCGGACAATACTTGGGCGTTTTCATTG
Amphipoea oculea genome assembly, chromosome: 7.
OX243868.1:7908633-7908649
TTTCTTCAGCGTCTGTTTAGGAAAAACTTC7908633GGGTCTAACAACTGCCTGCCAATAGCGGATACTTACCTATATCATAC
Amphipoea lucens genome assembly, chromosome: 5.
OX382360.1:7698685-7698701
TTTCTTCAGCGTCTGTTTAGGAAAAACTTC7698685GGGTCTAACAACTGCCTGCCAATAGCGGATACTTACCTATATCATAC
Allygus modestus genome assembly, chromosome: 2.
OY776112.1:62092049-62092065
TGGCGGTCTTTGAAAAAAACCCTTAAGAAG62092049GGGTCTAACAACTGCCTCCACGACTTTGCCAAAGGTAGGCATGATAG
Rhagium mordax genome assembly, chromosome: 10.
OY796665.1:1888475-1888491
TACAAACGAAATTTTCAATCATCCCAGCTC1888475GGGTCTAACAACTGCCTATATTACATAAACGACACCAGCTCCACTTT
Luperina nickerlii genome assembly, chromosome: 7.
OY979669.1:7821866-7821882
TCAGCGCAGCGTCTGTTTTGGGAAAACTTC7821866GGGTCTAACAACTGCCTGCCAATAACGGATACTTATATTATACTTAT
Maratus speciosus genome assembly, chromosome: 5.
OZ010791.1:233091906-233091922
ATGGTCAATTGCCATCTGGTGCATATTTTA233091906GGGTCTAACAACTGCCTTCCAGCTTTTAAAAGTAACTTTCGACGTGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGCAGTTGTTAGACCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGCAGTTGTTAGACCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.193 | 0.185 | search_plus_done; http://172.18.8.135:50400/match?q=AGGCAGTTGTTAGACCC&k=0&no_gap=0&offset=0&limit=50
0.350 | 0.156 | search_minus_done; http://172.18.8.135:50400/match?q=GGGTCTAACAACTGCCT&k=0&no_gap=0&offset=0&limit=36
0.369 | 0.019 | cgi_end;

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