GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 22:52:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES05N15, 5' end sequence.
FY384308.1:161-180
TCTAATGAATATCCTGTCGTGGATTACTCA161AGGCGTACTCAGGAAAGGGTAATTGATCAAAAGCTGATATTATCCCACGA
Dianthus caryophyllus mRNA, clone: CES06D06, 5' end sequence.
FY384440.1:251-270
TCTAATGAATATCCTGTCGTGGATTACTCA251AGGCGTACTCAGGAAAGGGTAATTGATCAAAAGCTGATATTATCCCACGA
Dianthus caryophyllus mRNA, clone: CES14A20, 5' end sequence.
FY387413.1:188-207
TCTAATGAATATCCTGTCGTGGATTACTCA188AGGCGTACTCAGGAAAGGGTAATTGATCAAAAGCTGATATTATCCCACGA
Dianthus caryophyllus mRNA, clone: CFES18_M05, 5' end sequence.
FY400877.1:272-291
TCTAATGAATATCCTGTCGTGGATTACTCA272AGGCGTACTCAGGAAAGGGTAATTGATCAAAAGCTGATATTATCCCACGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGGCGTACTCAGGAAAGGGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGCGTACTCAGGAAAGGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.456 | 0.448 | search_plus_done; http://172.18.8.135:50400/match?q=AGGCGTACTCAGGAAAGGGT&k=0&no_gap=0&offset=0&limit=50
0.484 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=ACCCTTTCCTGAGTACGCCT&k=0&no_gap=0&offset=0&limit=46
0.484 | 0.000 | cgi_end;

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