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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:53:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Apteryx australis mantelli genome assembly, scaffold: scaffold27.
LK391419.1:53658080-53658099
AGAAAACAAGCTGTCTGATTTTCCATTATT53658080AGGCTTGTGAAATGGCAGAGTTATATATGTCCTTGAGCAAGTAATTCCTT
IC0AAA54CF04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY281689.1:922-941
TGTTGAGTTTCCTGGCGGGAACCACGAGAT922AGGCTTGTGAAATGGCAGAGAAAACAGAGAAGTTAACTGTTTTGATGTCA
Medicago truncatula clone mth2-31d24, complete sequence.
AC138130.9:129310-129329
CGGCTGAAACCTATTAACAAACTCAACCAA129310AGGCTTGTGAAATGGCAGAGACAACCAAATCCTCGCCAATACCGAAAGTG
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737382.1:418521813-418521832
TGCTCATCTTTGCACCCAGGATGGGTGACA418521813AGGCTTGTGAAATGGCAGAGGCTGTCTTGAAAACACATGGAACTTGATGC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737389.1:421495017-421495036
TGCTCATCTTTGCACCCAGGATGGGTGACA421495017AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAAAACACATGGAACTTGATG
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737432.1:414408329-414408348
TGCTCATCTTTGCACCCAGGATGGGTGACA414408329AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAAAACACATGGAACTTGATG
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737439.1:414529068-414529087
TGCTCATCTTTGCACCCAGGATGGGTGACA414529068AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAAAACACATGGAACTTGATG
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737472.1:388133115-388133134
TGCTCATCTTTGCACCCAAGATGGATGACA388133115AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAAAACACATGGAACTTGATG
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY737508.1:358984257-358984276
TGCTTATCATTGCACCCAGGATGGATGACA358984257AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAGACACATGGACCGGTGCTC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737530.1:405535604-405535623
TGCTTATCATTGCACCCAGGATGGGTGACA405535604AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAGACACATGGACCTTGGTGC
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY737537.1:399741521-399741540
TGCTCATCTTTGCACCCAGGATGGGTGACA399741521AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAAAACACATGGAACTTGATG
Hordeum bulbosum genome assembly, chromosome: 6H_4.
OY737544.1:380696753-380696772
TGCTCATCTTTGCACCCAGGATGGGTGACA380696753AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAAAACACATGGAACTTGATG
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737616.1:302086935-302086954
TGCTCATCTTTGCACCCAGGATGGGTGACA302086935AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAAAACACATGGAACTTGATG
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737645.1:395457402-395457421
TGCTCATCTTTGCACCCAGGATGGGTGACA395457402AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAAAACACATGGAACTTGATG
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737871.1:378626787-378626806
TGCTCATCTTTGCACCCAAGATGGATGACA378626787AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAAAACACATGGAACTTGATG
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737878.1:399434905-399434924
TGCTTATCATTGCACCCAGGATGGGTGACA399434905AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAGACACATGGACCGGTGCTC
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY737885.1:373783821-373783840
TGCTCATCTTTGCACCCAGGATGGGTGACA373783821AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAAAACACATGGAACTTGATG
Hordeum bulbosum genome assembly, chromosome: 6H_4.
OY737892.1:404943894-404943913
TGCTCATCTTTGCACCCAAGATGGATGACA404943894AGGCTTGTGAAATGGCAGAGGCTGTCTTTGAAAACACATGGAACTTGATG
Candidatus Latescibacteria bacterium isolate cdc6522c-bbe9-4fa3-a52d-301d393956c9 genome assembly, chromosome: 2.
OY763182.1:305517-305536
GACACGCCGGCATGGCATGCCTCTGAATTC305517CTCTGCCATTTCACAAGCCTCCAATGGTGAATGGTTTCGATCATCGCAAA
USDA-FP_119000-603 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_A07 5', mRNA sequence.
CF504115.1:370-389
TGGCATCAAAACCGTTAACTTCTCTGTTTT370CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGA
USDA-FP_120000-309 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-22_A12 5', mRNA sequence.
CF504818.1:479-498
TGGCATCAAAACCGTTAACTTCTCTGTTTT479CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAA
USDA-FP_122000-957 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-57_G04 5', mRNA sequence.
CF507456.1:470-489
TGGCATCAAAACCGTTAACTTCTCTGTTTT470CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
USDA-FP_125000-310 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_E12 5', mRNA sequence.
CF509802.1:264-283
TGGCATCAAAACCGTTAACTTCTCTGTTTT264CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
UCRCS02_01M13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M13, mRNA sequence.
CF832389.1:489-508
TGGCATCAAAACCGTTAACTTCTCTGTTTT489CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
CGF1004531_C12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_C12 5', mRNA sequence.
CK932639.1:510-529
TGGCATCAAAACCGTTAACTTCTCTGTTTT510CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
CGF1004287_F03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_F03 5', mRNA sequence.
CK933271.1:514-533
TGGCATCAAAACCGTTAACTTCTCTGTTTT514CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
CGF1004286_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IF_C09 5', mRNA sequence.
CK933384.1:532-551
TGGCATCAAAACAGTTAACTTCTCTGTTTT532CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
CGF1004285_E04 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IVF_E04 5', mRNA sequence.
CK933439.1:241-260
TGGCATCAAAACCGTTAACTTCTCTGTTTT241CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
UCRCS04_2_029C08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_C08, mRNA sequence.
CV887123.1:487-506
TGGCATCAAAACCGTTAACTTCTCTGTTTT487CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
UCRCS09_26A03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-26A03-B5-1-4.b, mRNA sequence.
CX049173.1:490-509
TGGCATCAAAACCGTTAACTTCTCTGTTTT490CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
s13dNF45D02AT026_515712 Aphid-Infected Shoots Medicago truncatula cDNA, mRNA sequence.
CX527600.1:488-507
CACTTTCGGTATTGGCGAGGATTTGGTTGT488CTCTGCCATTTCACAAGCCTTTGGTTGAGTTTGTTAATAGGTTTCAGCCG
Citrus unshiu mRNA, clone: MWYBU54, 5'-end sequence, expressed in whole fruit.
DC894778.1:266-285
TGGCATCAAAACAGTTAACTTCTCTGTTTT266CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
Citrus unshiu mRNA, clone: MWYEE31, 5'-end sequence, expressed in whole fruit.
DC894854.1:478-497
TGGCATCAAAACAGTTAACTTCTCTGTTTT478CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
Citrus unshiu mRNA, clone: MWYEK59, 5'-end sequence, expressed in whole fruit.
DC894989.1:516-535
TGGCATCAAAACAGTTAACTTCTCTGTTTT516CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
Citrus unshiu mRNA, clone: MWYFM25, 5'-end sequence, expressed in whole fruit.
DC895408.1:516-535
TGGCATCAAAACAGTTAACTTCTCTGTTTT516CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
IC0AAA10DF02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY263132.1:488-507
TGGCATCAAAACCGTTAACTTCTCTGTTTT488CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
IC0AAA21AD02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY267300.1:234-253
TGGCATCAAAACAGTTAACTTCTCTGTTTT234CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
IC0AAA28DD06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY270113.1:506-525
TGGCATCAAAACAGTTAACTTCTCTGTTTT506CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
IC0AAA71AC05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY288956.1:459-478
TGGCATCAAAACAGTTAACTTCTCTGTTTT459CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
KN0AAH1AC08RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY304896.1:502-521
TGGCATCAAAACAGTTAACTTCTCTGTTTT502CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
KN0AAH1CH02RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY304986.1:502-521
TGGCATCAAAACAGTTAACTTCTCTGTTTT502CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
KN0AAH2AB10RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305038.1:502-521
TGGCATCAAAACAGTTAACTTCTCTGTTTT502CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
KN0AAH2AD04RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305048.1:502-521
TGGCATCAAAACAGTTAACTTCTCTGTTTT502CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
KN0AAH2AD06RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305049.1:502-521
TGGCATCAAAACAGTTAACTTCTCTGTTTT502CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
KN0AAH2AF04RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305058.1:502-521
TGGCATCAAAACAGTTAACTTCTCTGTTTT502CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
KN0AAH2CA06RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305118.1:502-521
TGGCATCAAAACAGTTAACTTCTCTGTTTT502CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
KN0AAH2CA12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305122.1:502-521
TGGCATCAAAACAGTTAACTTCTCTGTTTT502CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
KN0AAH2CD05RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305138.1:502-521
TGGCATCAAAACAGTTAACTTCTCTGTTTT502CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
KN0AAH3AG06RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305270.1:502-521
TGGCATCAAAACAGTTAACTTCTCTGTTTT502CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
KN0AAH3DD07RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305412.1:502-521
TGGCATCAAAACAGTTAACTTCTCTGTTTT502CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
CS00-C1-100-018-C04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY651101.1:521-540
TGGCATCAAAACCGTTAACTTCTCTGTTTT521CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
MBEAS94TF mth2 Medicago truncatula genomic clone 15P19, genomic survey sequence.
CG940981.1:331-350
CACTTTCGGTATTGGCGAGGATTTGGTTGT331CTCTGCCATTTCACAAGCCTTTGGTTGAGTTTGTTAATAGGTTTCAGCCG
MBELM89TR mth2 Medicago truncatula genomic clone 81O9, genomic survey sequence.
CG973673.1:334-353
CACTTTCGGTATTGGCGAGGATTTGGTTGT334CTCTGCCATTTCACAAGCCTTTGGTTGAGTTTGTTAATAGGTTTCAGCCG
MBEEL02TRB mth2 Medicago truncatula genomic clone 38B4, genomic survey sequence.
CG974049.1:334-353
CACTTTCGGTATTGGCGAGGATTTGGTTGT334CTCTGCCATTTCACAAGCCTTTGGTTGAGTTTGTTAATAGGTTTCAGCCG
mth2-159I18FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR488981.1:339-358
CACTTTCGGTATTGGCGAGGATTTGGTTGT339CTCTGCCATTTCACAAGCCTTTGGTTGAGTTTGTTAATAGGTTTCAGCCG
Citrus sinensis 1,6 rhamnosyltransferase mRNA, complete cds.
DQ119035.1:477-496
TGGCATCAAAACCGTTAACTTCTCTGTTTT477CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA
Medicago arabica genome assembly, chromosome: 8.
OX326971.1:55794482-55794501
CGCTTTCAGTATTGGCGAGGATTTGGTTGT55794482CTCTGCCATTTCACAAGCCTTTGGTTGAGTTTGTTGATAGGTTTCAGCCG
Medicago lupulina genome assembly, chromosome: 1.
OY283139.1:88972909-88972928
CGCTTTCGGTATTGGCGAGGATTTGGTTGT88972909CTCTGCCATTTCACAAGCCTTTGGTTGAGTTTGTTGATAGGTTTCAGCTG
Hordeum bulbosum genome assembly, chromosome: 6H_4.
OY737486.1:391441871-391441890
CATCAAGTTCCATGTGTTTTCAAAGACAAC391441871CTCTGCCATTTCACAAGCCTTGTCACCCATCCTGGGTGCAAAGATGAGCA
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737523.1:387652304-387652323
CATCAAGTTCCATGTGTTTTCAAAGACAGC387652304CTCTGCCATTTCACAAGCCTTGTCACCCATCCTGGGTGCAAAGATGAGCA
Citrus sinensis genome assembly, chromosome: 6.
OY754323.1:18252641-18252660
TGGCATCAAAACAGTTAACTTCTCTGTTTT18252641CTCTGCCATTTCACAAGCCTATCTCGTGGTCCCCGCCAGGAAACTCAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGCTTGTGAAATGGCAGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGCTTGTGAAATGGCAGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.266 | 0.258 | search_plus_done; http://172.18.8.135:50400/match?q=AGGCTTGTGAAATGGCAGAG&k=0&no_gap=0&offset=0&limit=50
2.770 | 2.504 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTGCCATTTCACAAGCCT&k=0&no_gap=0&offset=0&limit=32
2.797 | 0.027 | cgi_end;

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