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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:33:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Musa acuminata AAA Group Unigene50433_B1 mRNA sequence.
JV369341.1:204-223
TGTGCTTCTAAAAGTCCAAACAAGTCAACT204AGGGAACAGGATGATACCCCC
TSA: Musa acuminata AAA Group Unigene66447_NK1 mRNA sequence.
JV396503.1:242-261
TGTGCTTCTAAAAGTCCAAACAAGTCAACT242AGGGAACAGGATGATACCCCC
Embrapa_Musa_ABB_Stressed_Cachaco_EV81TF Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cDNA, mRNA sequence.
FL665562.1:129-148
GATGACGAGAGGCCACCGAAGCGATAGTGG129GGGGTATCATCCTGTTCCCTAGTTGACTTGTTTGGACTTTTAGAAGCACA
Musa acuminata subsp. malaccensis isolate AA chromosome 5.
CP126374.1:44603933-44603952
GATGACGAGAGGCCACCAAAGCGATAGTGG44603933GGGGTATCATCCTGTTCCCTAGTTGACTTGTTTGGACTTTTAGAAGCACA
Musa acuminata subsp. malaccensis isolate AA chromosome 16.
CP126385.1:44080497-44080516
GATGACGAGAGGCCACCGAAGCGATAGTGG44080497GGGGTATCATCCTGTTCCCTAGTTGACTTGTTTGGACTTTTAGAAGCACA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A05.
HG996470.1:44642384-44642403
GATGACGAGAGGCCACCAAAGCGATAGTGG44642384GGGGTATCATCCTGTTCCCTAGTTGACTTGTTTGGACTTTTAGAAGCACA
Musa schizocarpa genome assembly, chromosome: S05.
LS990919.1:50240968-50240987
GATGACGAGAGGCCACCGAAGCGATAGTGG50240968GGGGTATCATCCTGTTCCCTAGTTGACTTGTTTGGACTTTTAGAAGCACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGGAACAGGATGATACCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGGAACAGGATGATACCCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.289 | 0.280 | search_plus_done; http://172.18.8.135:50400/match?q=AGGGAACAGGATGATACCCC&k=0&no_gap=0&offset=0&limit=50
0.461 | 0.172 | search_minus_done; http://172.18.8.135:50400/match?q=GGGGTATCATCCTGTTCCCT&k=0&no_gap=0&offset=0&limit=48
0.465 | 0.004 | cgi_end;

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