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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 16:18:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Telmatherina bonti genome assembly, chromosome: 12.
OW121832.1:40508321-40508338
GATCCAGATGACGACACAGCGGTTTAAAGC40508321AGGGCTGATTTTTCTTCGCTCCATTTTCTTAAAACGGACGTAATGCAA
Telmatherina bonti genome assembly, chromosome: 19.
OW121839.1:38718476-38718493
GATCCAGATGACGACACAGCGGTTTAAAGC38718476AGGGCTGATTTTTCTTCGCTCCATTTTCTTAAAACGGACGTAATGCAA
Telmatherina bonti genome assembly, chromosome: 21.
OW121841.1:33026546-33026563
GATCCAGATGACGACACAGCGGTTTAAAGC33026546AGGGCTGATTTTTCTTCGCTCCATTTTCTTAAAATGGACGTAATGCAA
KS15036A03 KS15 Capsicum annuum cDNA, mRNA sequence.
GD066720.1:223-240
TTACTTCAATTTTTCTCTCTTTCTTTCATT223AGGGCTGATTTTTCTTCGTATTTTTTCACTTGGGTTGTGAAAAATTTT
TSA: Capsicum annuum MGMT_Contig11476, mRNA sequence.
JW061720.1:167-184
TTACTTCAATTTTTCTCTCTTTCTTTCATT167AGGGCTGATTTTTCTTCGTATTTTTTCACTTGGGTTGTGAAAAATTTT
ORNL093 Poplar BAC Library Populus trichocarpa genomic similar to Transcription factor, genomic survey sequence.
BH860619.1:717-734
GGCTTTTATCACTAATAAATAGAGGCTCCT717AGGGCTGATTTTTCTTCGATCTTGCACCAATAGAAACTCCAAAAATAG
Populus balsamifera subsp. trichocarpa teosinte-branched-like protein (TB1) gene, complete cds.
AF309092.1:66-83
GGCTTTTATCACTAATAAATAGAGGCTCCT66AGGGCTGATTTTTCTTCGATCTTGCACCAATAGAAACTCCAAAAATAG
Populus balsamifera subsp. trichocarpa teosinte-branched-like protein (TB1) gene, complete cds.
AF309093.1:13-30
ATAGAGGCTCCT13AGGGCTGATTTTTCTTCGATCTTGCACCAATAGAAACTCCAAAAATAG
Populus deltoides teosinte-branched-like protein (TB1) gene, complete cds.
AF309094.1:14-31
AATAGAGGCTCCT14AGGGCTGATTTTTCTTCGATCTTGCACCAATAGGAACTCCAAAAATAG
Capsicum annuum Takanotsume DNA, chromosome 11, sequence.
AP026706.1:86749192-86749209
TTACTTCAATTTTTCTCTCTTTCTTTCATT86749192AGGGCTGATTTTTCTTCGTATTTTTTCACTTGGGTTGTGAAAAATTTT
Leptosphaeria maculans lepidii ibcn84_scaffold00028 complete sequence.
FO905996.1:88456-88473
AATAGCTGCAACGCTGTGAGTGTTGCGAAC88456AGGGCTGATTTTTCTTCGTTGAACATCCTACGCTCAATCATAGGCCTC
Populus nigra genome assembly, chromosome: 10.
OX637681.1:9112187-9112204
GGCTTTTATCACTAATAAATAGAGGCTCCT9112187AGGGCTGATTTTTCTTCGATCTTGCACCAATAGAAACTCCAAAAATAG
Persicaria maculosa genome assembly, chromosome: 2.
OY998252.1:74553603-74553620
TGATTTTACATATGGATGAGCATAATCTAT74553603AGGGCTGATTTTTCTTCGATTGCTTAGTTATTGCTTGAGTTGGCTCAT
Persicaria maculosa genome assembly, chromosome: 4.
OY998254.1:65647658-65647675
ACTTGCAAAATAGGGACGAGCATGATCTAT65647658AGGGCTGATTTTTCTTCGATTGCTTAGTTGTTGCTTGAGTTGGCTCAT
Persicaria maculosa genome assembly, chromosome: 6.
OY998256.1:38384364-38384381
ACTTGCAAAATAGGGATGAGCATGATCTAT38384364AGGGCTGATTTTTCTTCGATTGCTTAGTTGTTGCTTGAGTTGGCTCAT
Persicaria maculosa genome assembly, chromosome: 6.
OY998256.1:48102039-48102056
ACTTGCAAAATAGGGACGAGCATGATCTAT48102039AGGGCTGATTTTTCTTCGATTGCTTAGTTGTTGCTTGGGTTAGCTCAT
Persicaria maculosa genome assembly, chromosome: 8.
OY998258.1:26127064-26127081
AGTTGCAAAATATGGATGAGCATGATGTAT26127064AGGGCTGATTTTTCTTCGATTGCTTAGTTGTTGCTTGAGTTGGTTCAT
Persicaria maculosa genome assembly, chromosome: 8.
OY998258.1:68071598-68071615
ACTTGCAAAATAGGGACGAGCATGATCTAT68071598AGGGCTGATTTTTCTTCGATTGCTTAGTTGTTGCTTGGGTTAGCTCAT
Persicaria maculosa genome assembly, chromosome: 10.
OY998260.1:41753463-41753480
ACTTGCAAAATAGGGACGGGCATGATATAT41753463AGGGCTGATTTTTCTTCGATTGCTTAGTTGTTGCTTGAGTTAGCTCAT
Mycolicibacterium sp. TUM20985 DNA, complete genome.
AP027291.1:5371578-5371595
TTCGCAACGGCCCGGACAGCCGCTATGGTG5371578AGGGCTGATTTTTCTTCGATCCGGCAGGGATGTGCTTATGAGCGAACC
Stieleria maiorica strain Mal15 chromosome.
CP036264.1:6098655-6098672
CGTGTGATCTGTTTTCGCAGAAATGCGTTC6098655AGGGCTGATTTTTCTTCGTCGGTCATGCGGTTGTGCTTTGCCGGTGGC
Streptococcus anginosus strain 47S1 chromosome.
CP088916.1:236359-236376
AAATCAGAATCATATAATTCTGTAAGCAAT236359AGGGCTGATTTTTCTTCGGATGTTATTTACCAAATAATAACAGATAGA
Glaucopsyche alexis genome assembly, chromosome: 1.
FR990043.1:11591145-11591162
ATGTCAGAAAAATTAGAACAAAGGTTAAAG11591145AGGGCTGATTTTTCTTCGTTGTTAAGGTGTGATACTCTAAGTTGATCT
Glaucopsyche alexis genome assembly, chromosome: 3.
FR990045.1:29526338-29526355
ATGTCAGAAAAATTAGAACAAAGGTTAAAG29526338AGGGCTGATTTTTCTTCGTTGTTAAGGTGTGATACTCTAAGTTGATCT
Coccinella septempunctata genome assembly, chromosome: 1.
OU015573.1:43349949-43349966
CTGCATGGGAATACACGGTATGATTTCAGG43349949AGGGCTGATTTTTCTTCGTTGTGTTCATCAATCAGTTCCTTTGATTGG
Coccinella septempunctata genome assembly, chromosome: 2.
OU015574.1:12939938-12939955
CTGCATAGGAATACACGGTATGATTTTAGG12939938AGGGCTGATTTTTCTTCGTTGTGTTCATCAATCAGTTCCTTTGATTGG
Coccinella septempunctata genome assembly, chromosome: 4.
OU015576.1:35759659-35759676
CTGCATAGGAATACACGGTATGATTTTAGG35759659AGGGCTGATTTTTCTTCGTTGTGTTCATCAATCAGTTCCTTTGATTGG
Coccinella septempunctata genome assembly, chromosome: 5.
OU015577.1:8631403-8631420
CTGCATAGGAATACACGGTATGATTTTAGG8631403AGGGCTGATTTTTCTTCGTTGTGTTCATCAATCAGTTCCTTTGATTGG
Coccinella septempunctata genome assembly, chromosome: X.
OU015581.1:14082567-14082584
CTGCATAGGAATACACGGTATGATTTTAGG14082567AGGGCTGATTTTTCTTCGTTGTGTTCATCAATCAGTTCCTTTGATTGG
Apamea monoglypha genome assembly, chromosome: 9.
OU426923.1:5244472-5244489
TTAACTCAATCATTCGACGTCAATCCACTA5244472AGGGCTGATTTTTCTTCGAGGAATAAAATTGACGTTTGGCAGTTTTTG
Harmonia axyridis genome assembly, chromosome: 2.
OU611928.1:37525600-37525617
CTACGTGAGAATACACGATACAATTTTTTG37525600AGGGCTGATTTTTCTTCGTTGTGTTCATCAATCGGTTCTTTTGATTGG
Ichneumon xanthorius genome assembly, chromosome: 10.
OU824209.1:6835354-6835371
AGGCAGTCGAAAACTGTGTTTTATATCCCG6835354AGGGCTGATTTTTCTTCGAAGCCAGCTCGAACTTTTCGCTGAATTCTT
Apamea sordens genome assembly, chromosome: 20.
OX244005.1:2895849-2895866
GTTTAAGTTTTTTTGACTACTGTTTTTTTT2895849AGGGCTGATTTTTCTTCGATAACTTTTATTCGAGGAATACAATTTATT
Netelia dilatata genome assembly, chromosome: 1.
OX328011.1:42649791-42649808
TAAAGGTGAAGTTTACATCGAAAAACTTTA42649791AGGGCTGATTTTTCTTCGCTCCAACGTAAGTTTTCCTTTTTTTGTTTC
Apamea epomidion genome assembly, chromosome: Z.
OX382224.1:22773701-22773718
ACTTAGACACTAAACTACTTAATTTTACTA22773701AGGGCTGATTTTTCTTCGCCAGAATTACTGTTCCTCAGGTGTTGGTCG
Dryobota labecula genome assembly, chromosome: 19.
OX383302.1:16472747-16472764
AAAATTTGTGCATTTTGCGAGAATAAATTA16472747AGGGCTGATTTTTCTTCGTCAGATATTTTTAAACTAATATATAAAGTT
Orthosia gracilis genome assembly, chromosome: 8.
OX387272.1:33223401-33223418
AAAAACATTAGTCGATTCTTCTCGTGACCA33223401AGGGCTGATTTTTCTTCGGCCAAGGAATCAACATTGCCATTAAACGTG
Apamea crenata genome assembly, chromosome: 7.
OX451359.1:5141966-5141983
TTAACTCAATCATTCGACGTCAATCCATTA5141966AGGGCTGATTTTTCTTCGAGGAACTTTTATTCGAGGAATAAAATTGAC
Apamea crenata genome assembly, chromosome: 13.
OX451365.1:12109281-12109298
ATACAATGGTAATCAAATTTTAATAAGCCT12109281AGGGCTGATTTTTCTTCGTTACATAATTTTTATTCGTGGAATAAAATT
Apamea crenata genome assembly, chromosome: 26.
OX451378.1:441748-441765
TTACGTAATTAAAGTTATCTTTCACATTTT441748AGGGCTGATTTTTCTTCGTGGAATAAAATTGACGTTTGACAGTTTTTG
Apamea anceps genome assembly, chromosome: 17.
OX637517.1:10292731-10292748
GTATTATTTTTACATATTTTTGTTTTGGTT10292731AGGGCTGATTTTTCTTCGTGGAATAAAATTTTCGTCTAACAGATTTTG
Apamea anceps genome assembly, chromosome: 25.
OX637525.1:11902070-11902087
CTCAAGAGCCTGCACATAAATATTATCTTA11902070AGGGCTGATTTTTCTTCGCCAGATAACTATTATTCGAGGAATAAAATT
Noctua janthina genome assembly, chromosome: 15.
OY755065.1:4831342-4831359
AAACACGAAGCAGTTTCTGGTATTTATTTT4831342AGGGCTGATTTTTCTTCGTCAGATCTTTTATCCAAGGAATAAAATTGT
Diaperis boleti genome assembly, chromosome: Y.
OY757245.1:35882204-35882221
AATCCATTTAGGCAGCATCCCCCAAATATT35882204AGGGCTGATTTTTCTTCGTTTCCTCCTTTTGAGACCTTGATTTTCAAT
Trididemnum clinides genome assembly, chromosome: 10.
OY776293.1:4229407-4229424
ACCTGTATTTGGACTTGAAGATGATCCTTC4229407AGGGCTGATTTTTCTTCGATTAAATTTTTTTCCGAATTTGTAAATGAA
Plectropomus leopardus DNA, chromosome 5, nearly complete sequence.
AP022704.1:17027194-17027211
GAAGCCAGGGAGTGACTATTAATGTGTGTG17027194CGAAGAAAAATCAGCCCTGAAGGATATTTTGTTTTTCTACTGTGTTAG
Telmatherina bonti genome assembly, chromosome: 21.
OW121841.1:33027774-33027791
TAGCATTATGTCCATTTTAAGAAAATGGAG33027774CGAAGAAAAATCAGCCCTGCTTTAAACCGCTGTGTCGTCATCTGGATC
MAG: Nitrospiraceae bacterium isolate bin398 chromosome.
CP070737.1:1952133-1952150
CATGCGAAATCTCAAATTCTCTGTTTTTCT1952133CGAAGAAAAATCAGCCCTGGCCTGGCTTAAAGCAAAAAAATCATTCAT
Populus trichocarpa clone Pop1-16J18, complete sequence.
AC149481.1:70390-70407
CTATTTTTGGAGTTTCTATTGGTGCAAGAT70390CGAAGAAAAATCAGCCCTAGGAGCCTCTATTTATTAGTGATAAAAGCC
Populus trichocarpa clone Pop1-12C14, complete sequence.
AC149541.1:72260-72277
CTATTTTTGGAGTTTCTATTGGTGCAAGAT72260CGAAGAAAAATCAGCCCTAGGAGCCTCTATTTATTAGTGATAAAAGCC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:43893936-43893953
GCTAATGATAACCTAGGAACCAAGTTTGGT43893936CGAAGAAAAATCAGCCCTCCTAATTATGAAAAGTGGCCGAGAGCTACC
Sarcandra glabra structural maintenance of chromosomes protein 1 mRNA, partial cds.
KM397440.1:480-497
TGAGGAACTGGAGGAACAAAAGGGAAGGGC480CGAAGAAAAATCAGCCCTTGTTTATCAGAAAAAAAGAACGGTTGTCAT
Persicaria maculosa genome assembly, chromosome: 1.
OY998251.1:79279553-79279570
GTGGCCTCAGGGAGCAACAAACTCAGCAAC79279553CGAAGAAAAATCAGCCCTATAAATCATGCTTATCCATAGTTTGCAACT
Persicaria maculosa genome assembly, chromosome: 2.
OY998252.1:34561464-34561481
ATGAGCTAACTCAAGCAACAACTAAGCAAT34561464CGAAGAAAAATCAGCCCTATAGATCATGCTCGTCCCTATTTTGCAAGT
Persicaria maculosa genome assembly, chromosome: 6.
OY998256.1:35133403-35133420
GTGTCCTAAGGGAGCAACAAACTCAGCAAC35133403CGAAGAAAAATCAGCCCTATACATCATGCTCATCCATATTTTGCAAAT
Persicaria maculosa genome assembly, chromosome: 6.
OY998256.1:42015975-42015992
ATGAGCTAACTCAAGCAACAACTAAGCAAT42015975CGAAGAAAAATCAGCCCTATAGATGATGCTCATCTATATTTTGCAACT
Persicaria maculosa genome assembly, chromosome: 8.
OY998258.1:37469430-37469447
GCGGCCTAAGGGAGCAACAAACTCAGTAAC37469430CGAAGAAAAATCAGCCCTATACATCATGCTCATCCATATTTTGCAACT
Pinctada fucata DNA, chromosome 11, nearly complete sequence, Principal Pseudohaplotype.
AP027112.1:43120639-43120656
TTTGGAAAAAAATATATATCTACGTCAAAA43120639CGAAGAAAAATCAGCCCTTTTTTGGACAAATTCTTGTTCAAGAAACAA
Adineta vaga breed AD008 chromosome 4.
CP075496.1:7174661-7174678
ATATGATCGATCATCTAATCAAGAATAATA7174661CGAAGAAAAATCAGCCCTTTGAAGAAAAGGTCATACGTAGCAAAGAAA
Coccinella septempunctata genome assembly, chromosome: 1.
OU015573.1:17359263-17359280
CCAATCAAAGGAACTGATTGATGAACACAA17359263CGAAGAAAAATCAGCCCTCCTAAAATCATACCGTGTATTCCTATGCAG
Noctua janthe genome assembly, chromosome: 12.
OU342564.1:13766116-13766133
ACAATTTTATTCCTTGGATAAAAGATCTGA13766116CGAAGAAAAATCAGCCCTAAAAGAAATACCAGAAACTGCTTTGTGTTT
Harmonia axyridis genome assembly, chromosome: 1.
OU611927.1:43831962-43831979
CCAATCAAAAGAACCGATTGATGAACACAA43831962CGAAGAAAAATCAGCCCTCAAAAAATTGTATCGTGTATTCTCACGTAG
Diachrysia chrysitis genome assembly, chromosome: 26.
OW028667.1:715977-715994
TGAAATTTGTAAATCGTAAATTTTAATCCA715977CGAAGAAAAATCAGCCCTTTTAATGAGGTAGGCAGTAATGTTTCTACT
Tridacna crocea genome assembly, chromosome: 12.
OX031067.1:34223733-34223750
GAAAATATGATGCAGTTTTATCGAAACATT34223733CGAAGAAAAATCAGCCCTGACCTTCTCCGCTGTCACGGTGTCATCCTG
Eudemis profundana genome assembly, chromosome: 17.
OX344811.1:17355279-17355296
CTGGAAAACTGGCAGTCTTTATTGTCAAGT17355279CGAAGAAAAATCAGCCCTCATCATAAATGACTAAGCGTCGAGTAGTGT
Apamea epomidion genome assembly, chromosome: Z.
OX382224.1:22753315-22753332
AATTTTATTCTTCGAATAAAAGTTATCTGG22753315CGAAGAAAAATCAGCCCTTAGTAAAATGAAGTAGTTTAGTGTCTAAGT
Apamea epomidion genome assembly, chromosome: 2.
OX382226.1:10592345-10592362
CAGTCAAAATTATTCCTCGAATAAAGTTAT10592345CGAAGAAAAATCAGCCCTAAAGCAAAAGACAGCGGCCGATAATGGCCG
Apamea crenata genome assembly, chromosome: 9.
OX451361.1:17981748-17981765
CAAAATTATACCCCGGTTAAAATTATCTGG17981748CGAAGAAAAATCAGCCCTTATACTGTTTAATCGCAGTTGCCCAAAAGT
Eremobia ochroleuca genome assembly, chromosome: 13.
OX451397.1:19181215-19181232
TCCATTTTATTTCTCGAATAAAAGTTATCT19181215CGAAGAAAAATCAGCCCTAACTTAAACGATTCACAAACTAAAATATAG
Lymantria dispar genome assembly, chromosome: 8.
OY755133.1:12754627-12754644
GTAGCGATTACGGTATTATTCCTCATATGG12754627CGAAGAAAAATCAGCCCTAGTCGTGGTAGCTCTGCTACCCTAAGGACT
Xanthia togata genome assembly, chromosome: 2.
OY970789.1:13946082-13946099
AATTTAATTCATTGGTTTTAAAATATCTGA13946082CGAAGAAAAATCAGCCCTTCATTTATTATTCATACAATATGCACTTCG
Pyrausta purpuralis genome assembly, chromosome: 13.
OZ001655.1:12140177-12140194
GATAGATTTCAATGCATTCAATGCAACCTA12140177CGAAGAAAAATCAGCCCTTAAACATCCCACTGCTGGGAAACGGCTCAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGGCTGATTTTTCTTCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGGCTGATTTTTCTTCG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.511 | 0.503 | search_plus_done; http://172.18.8.135:50400/match?q=AGGGCTGATTTTTCTTCG&k=0&no_gap=0&offset=0&limit=50
0.725 | 0.213 | search_minus_done; http://172.18.8.135:50400/match?q=CGAAGAAAAATCAGCCCT&k=0&no_gap=0&offset=0&limit=5
0.742 | 0.017 | cgi_end;

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