GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 16:25:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Thysanoteuthis rhombus genome assembly, chromosome: 11.
OY735208.1:34904986-34905007
ATGGGATAAGGAAAAAGTGATCAAATTCTG34904986AGGGGTGAAGGGATTTGTTTATATAAGATGTACTGCTGTGCGAAAACATCTA
RCLG379TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLG379, mRNA sequence.
EG662775.1:535-556
ATATATATATATATATGATCTCTTGTAGAT535ATAAACAAATCCCTTCACCCCTACCCCCCTCCCCAACCAAAAGAATTAGATT
RCLGI55TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLGI55, mRNA sequence.
EG664176.1:490-511
ATATATATATATATATGATCTCTTGTAGAT490ATAAACAAATCCCTTCACCCCTACCCCCCTCCCCAACCAAAAGAATTAGATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGGGGTGAAGGGATTTGTTTAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGGGTGAAGGGATTTGTTTAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=AGGGGTGAAGGGATTTGTTTAT&k=0&no_gap=0&offset=0&limit=50
0.227 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=ATAAACAAATCCCTTCACCCCT&k=0&no_gap=0&offset=0&limit=49
0.228 | 0.001 | cgi_end;

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