GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 15:00:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Alsophila aescularia genome assembly, chromosome: 5.
OX276378.1:42268737-42268756
TATACAAAGTAGGTACATAGGCATCAATGT42268737AGGTAGTCACAGTCATCTGAGGCTGGGCTTTGATGAAATAAATATATATA
Luidia sarsii genome assembly, chromosome: 11.
OX465111.1:4569859-4569878
AGGAGAGAAAAATAGTATAAACAAGGGAGA4569859AGGTAGTCACAGTCATCTGAGATGATTGTTTTTTTAATGCCACTGCTTCA
RTNIT1_18_D02.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone RTNIT1_18_D02_A029 3', mRNA sequence.
DR059508.1:61-80
GGTGATGTTGTGAAGATAATGCTGCATTAA61TCAGATGACTGTGACTACCTGGAAAACAATGTGGCTGTGGCTGTGGCTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGGTAGTCACAGTCATCTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGTAGTCACAGTCATCTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=AGGTAGTCACAGTCATCTGA&k=0&no_gap=0&offset=0&limit=50
0.150 | 0.057 | search_minus_done; http://172.18.8.135:50400/match?q=TCAGATGACTGTGACTACCT&k=0&no_gap=0&offset=0&limit=48
0.151 | 0.001 | cgi_end;

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