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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-15 07:19:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

EBENXNS01E1UYU 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EH892948.1:17-38
TGTCTTTTCTTCTCTC17AGGTCGTTTTTCTCCTGTGTCAACTCGCGGGACTCATCTGTCAATGCGGTGT
RR1BG07JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EV532865.1:738-759
TCTGATTTGAGCGATGTCTTTTCTTCTCTC738AGGTCGTTTTTCTCCTGTGTCAGCTCGCGGGACTCATCAGTCAAAGCGGTGT
RR3B319JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EV546279.1:737-758
TCTGATTTGAGCGATGTCTTTTCTTCTCTC737AGGTCGTTTTTCTCCTGTGTCAGCTCGCGGGACTCATCAGTCAAAGCGGTGT
RS2AL39JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EW728524.1:790-811
TCTGATTTGAGCGACGTCTTTTCTTCTCTC790AGGTCGTTTTTCTCCTGTGTCAGCTCGCGGGACTCGTCTGTCAAAGCGGTGT
Raphanus sativus mRNA, clone: RSCL06E19, 5' end sequence.
FY434950.1:772-793
TCTGATTTGAGCGATGTCTTTTCTTCTCTC772AGGTCGTTTTTCTCCTGTGTCAGCTCGCGGGACTCATCAGTCAAAGCGGTGT
TSA: Raphanus sativus var. sativus RNA, contig: WG3_3983.
FX664163.1:783-804
TCTGATTTGAGCGACGTCTTTTCTTCTCTC783AGGTCGTTTTTCTCCTGTGTCAGCTCGCGGGACTCGTCTGTCAAAGCGGTGT
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_8812.
FX702745.1:773-794
TCTGACTTGAGCGATGTCTTTTCTTCTCTC773AGGTCGTTTTTCTCCTGTGTCAGCTCGCGGGACTCATCTGTCAAAGCGGTGT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_20018.
FX737932.1:770-791
TCTGACTTGAGCGATGTCTTTTCTTCTCTC770AGGTCGTTTTTCTCCTGTGTCAGCTCGCGGGACTCATCTGTCAAAGCGGTGT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_5102.
FX748018.1:794-815
TCTGATTTGAGCGACGTCTTTTCTTCTCTC794AGGTCGTTTTTCTCCTGTGTCAGCTCGCGGGACTCGTCTGTCAAAGCGGTGT
Brassica napus cultivar Xiang5A chromosome 2.
CP123877.1:37796578-37796599
TCTGACTTGAGCGACGTCTTTTCTTCTCTC37796578AGGTCGTTTTTCTCCTGTGTCAGCTACAGAAAGAACCATTTTTGTTATACAA
Brassica napus genome assembly, chromosome: A01.
HG994355.1:24682909-24682930
TCTGACTTGAGCGATGTCTTTTCTTCTCTC24682909AGGTCGTTTTTCTCCTGTGTCAGCTACATAAACAACCATTTTTGTTATACAA
Brassica rapa genome, scaffold: A01.
LR031571.1:29646606-29646627
TCTGACTTGAGCGATGTCTTTTCTTCTCTC29646606AGGTCGTTTTTCTCCTGTGTCAGCTACATAAAGAACCATTGTTGTTATACAA
Brassica oleracea HDEM genome, scaffold: C5.
LR031877.1:40507872-40507893
TCTGACTTCAGTGATATCTTCTCTTCTCTC40507872AGGTCGTTTTTCTCCTGTGTCAACTACAGAAAAAACCTTGGTTATACAAATC
Brassica oleracea HDEM genome, scaffold: C1.
LR031878.1:40240147-40240168
TCTGACTTGAGCGATGTCTTTTCTTCTCTC40240147AGGTCGTTTTTCTCCTGTGTCAGCTACAGAAAGAACCATTGTTATACAAGCA
Brassica rapa genome assembly, chromosome: A01.
LS974617.2:30176502-30176523
TCTGACTTGAGCGATGTCTTTTCTTCTCTC30176502AGGTCGTTTTTCTCCTGTGTCAGCTACATAAAGAACCATTGTTGTTATACAA
Sequence 529 from patent US 7345217.
EA483150.1:413-434
ACACCGCATTGACAGATGAGTCCCGCGAGT413TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 97 from Patent WO2008061156.
GM041900.1:395-416
ACACCGCATTGACAGATGAGTCCCGCGAGT395TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 99 from Patent WO2008061156.
GM041902.1:444-465
ACACCGCATTGACAGATGAGTCCCGCGAGT444TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 122 from patent US 7763775.
GX386229.1:386-407
ACACCGCATTGACAGATGAGTCCCGCGAGT386TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 123 from patent US 7763775.
GX386230.1:227-248
ACACCGCATTGACAGATGAGTCCCGCGAGT227TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 597 from patent US 8030546.
GY455178.1:413-434
ACACCGCATTGACAGATGAGTCCCGCGAGT413TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 3836 from patent US 8030546.
GY456110.1:413-434
ACACCGCATTGACAGATGAGTCCCGCGAGT413TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 97 from patent US 8030541.
GY485462.1:395-416
ACACCGCATTGACAGATGAGTCCCGCGAGT395TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 99 from patent US 8030541.
GY485463.1:444-465
ACACCGCATTGACAGATGAGTCCCGCGAGT444TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 97 from patent US 8217224.
GZ367575.1:395-416
ACACCGCATTGACAGATGAGTCCCGCGAGT395TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 99 from patent US 8217224.
GZ367576.1:444-465
ACACCGCATTGACAGATGAGTCCCGCGAGT444TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 97 from patent US 8519224.
HJ324380.1:395-416
ACACCGCATTGACAGATGAGTCCCGCGAGT395TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 99 from patent US 8519224.
HJ324381.1:444-465
ACACCGCATTGACAGATGAGTCCCGCGAGT444TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 529 from patent US 8809630.
HK100236.1:413-434
ACACCGCATTGACAGATGAGTCCCGCGAGT413TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 2557 from patent US 9029523.
HK787389.1:666-687
TACTTGTATAACAACGGTTCTTTCTGTAGT666TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 24050 from patent US 9029523.
HK808814.1:666-687
TACTTGTATAACAACGGTTCTTTCTGTAGT666TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 97 from patent US 9277762.
HL715008.1:395-416
ACACCGCATTGACAGATGAGTCCCGCGAGT395TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 99 from patent US 9277762.
HL715009.1:444-465
ACACCGCATTGACAGATGAGTCCCGCGAGT444TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 539 from Patent EP2542563.
JB225557.1:413-434
ACACCGCATTGACAGATGAGTCCCGCGAGT413TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 539 from patent US 9676831.
KH781594.1:413-434
ACACCGCATTGACAGATGAGTCCCGCGAGT413TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 539 from Patent EP3184538.
LP940134.1:413-434
ACACCGCATTGACAGATGAGTCCCGCGAGT413TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 387 from patent US 10113177.
MM133509.1:227-248
ACACCGCATTGACAGATGAGTCCCGCGAGT227TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 387 from patent US 10266841.
MM848368.1:227-248
ACACCGCATTGACAGATGAGTCCCGCGAGT227TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 597 from patent US 10597667.
MO966331.1:413-434
ACACCGCATTGACAGATGAGTCCCGCGAGT413TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Sequence 3836 from patent US 10597667.
MO967263.1:413-434
ACACCGCATTGACAGATGAGTCCCGCGAGT413TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
33342 Lambda-PRL2 Arabidopsis thaliana cDNA clone 154G16T7, mRNA sequence.
AA720149.1:36-57
ACACCGCATTGACAGATGANTCCCGCGANT36TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana cDNA clone:APZ18c05R, 5' end.
AV526645.1:444-465
ACACCGCATTGACAGATGAGTCCCGCGAGT444TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana cDNA clone:RAFL11-07-L01, 5' end.
BP562654.1:432-453
ACACCGCATTGACAGATGAGTCCCGCGAGT432TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Thellungiella halophila cDNA clone: RTFL01-09-A12, 5'end sequence.
BY805875.1:337-358
ACACGGCGTTGACAGATGAGTCCCGCGAGT337TGACACAGGAGAAAAACGACCTACGAGAAGAGAAAACATCGCTGAAGTCGGA
Thellungiella halophila cDNA clone: RTFL01-16-E13, 5'end sequence.
BY810765.1:344-365
ACACGGCGTTGACAGATGAGTCCCGCGAGT344TGACACAGGAGAAAAACGACCTACGAGAAGAGAAAACATCGCTGAAGTCGGA
Thellungiella halophila cDNA clone: RTFL01-48-A15, 5'end sequence.
BY832222.1:344-365
ACACGGCGTTGACAGATGAGTCCCGCGAGT344TGACACAGGAGAAAAACGACCTACGAGAAGAGAAAACATCGCTGAAGTCGGA
BN15.022M22F020212 BN15 Brassica napus cDNA clone BN15022M22, mRNA sequence.
CD814341.1:417-438
ACACCGCCTTGACAGATGAGTCTCGCGAGC417TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Brassica oleracea var. viridis mRNA, clone: KALE-073B22, 5' end sequence.
DK483505.1:398-419
ACACCGCTTTGACAGATGAGTCTCGCGAGC398TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Brassica oleracea var. viridis mRNA, clone: KALE-113K22, 5' end sequence.
DK499028.1:396-417
ACACCGCTTTGACAGATGAGTCTCGCGAGC396TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Brassica oleracea var. viridis mRNA, clone: KALE-147H18, 5' end sequence.
DK511940.1:389-410
ACACCGCTTTGACAGATGAGTCTCGCGAGC389TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
12832814 CERES-AN65 Arabidopsis thaliana cDNA clone 1363715 5', mRNA sequence.
DR234136.1:448-469
ACACCGCATTGACAGATGAGTCCCGCGAGT448TGACACAGGAGAAAAACGACCTGAGAGA
12841668 CERES-AN65 Arabidopsis thaliana cDNA clone 1366545 5', mRNA sequence.
DR234137.1:464-485
ACACCGCATTGACAGATGAGTCCCGCGAGT464TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
11073583 CERES-AN65 Arabidopsis thaliana cDNA clone 1353168 5', mRNA sequence.
DR234138.1:425-446
ACACCGCATTGACAGATGAGTCCCGCGAGT425TGACACAGGAGAAAAACGACCTGAGAGANNNNNAGACATCGCTGAAATCAGA
12822750 CERES-AN65 Arabidopsis thaliana cDNA clone 1358512 5', mRNA sequence.
DR234140.1:448-469
ACACCGCATTGACAGATGAGTCCCGCGAGT448TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
958143 CERES-148 Arabidopsis thaliana cDNA clone 155837 5', mRNA sequence.
DR346893.1:369-390
ACACCGCATTGACAGATGAGTCCCGCGAGT369TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
AYARI39TF pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG449376.1:430-451
ACACCGCATTGACAGATGAGTCCCGCGAGT430TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
OL5630R Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL5630, mRNA sequence.
EH422691.1:91-112
ACACCGCTTTGACAGATGAGTCTCGCGAGC91TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
24RDBNH_UP_169_G08_14DEC2006_052 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
ES921695.1:161-182
ACATCGCTTTGACAGATGAATCCCGCGAGC161TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTC
37RDBRH_UP_076_B09_20JAN2006_077 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
ES931750.1:362-383
ACACCGCTTTAACAGATGAGTCCCGCGAGC362TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
37RDBRH_UP_080_C01_23JAN2006_011 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
ES932049.1:362-383
ACACCGCTTTAACAGATGAGTCCCGCGAGC362TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
RR1AC57TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EV525481.1:395-416
ACACCGCTTTGACTGATGAGTCCCGCGAGC395TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAATCAGA
RR1B548TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EV528082.1:404-425
ACACCGCTTTGACTGATGAGTCCCGCGAGC404TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAATCAGA
RR1BG07TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EV529022.1:368-389
ACACCGCTTTGACTGATGAGTCCCGCGAGC368TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAATCAGA
RR3B319TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EV551123.1:365-386
ACACCGCTTTGACTGATGAGTCCCGCGAGC365TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAATCAGA
RR4B931TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EV569522.1:386-407
ACACCGCTTTGACTGATGAGTCCCGCGAGC386TGACACAGGAGAAAAACGACCTGAGAGAAGAAAATACATCGCTCAAATCAGA
RS2AL39TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EW724046.1:375-396
ACACCGCTTTGACAGACGAGTCCCGCGAGC375TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACGTCGCTCAAATCAGA
RS3AP95TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
EW733112.1:408-429
ACACCGCTTTGACAGACGAGTCCCGCGAGC408TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACGTCGCTCAAATCAGA
BR002592 light-chilled whole plant cDNA library KBCD Brassica rapa subsp. pekinensis cDNA clone KBCD-010C05 5', mRNA sequence.
EX017948.1:245-266
ACACCGCTTTGACAGATGAGTCCCGCGAGC245TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
BR027936 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-116B09 5', mRNA sequence.
EX043292.1:209-230
ACACCGCTTTGACAGATGAGTCCCGCGAGC209TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
BR096518 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-058C01 5', mRNA sequence.
EX110228.1:370-391
ACACCGCTTTGACAGATGAGTCCCGCGAGC370TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
BR114873 root cDNA library KHRT Brassica rapa subsp. pekinensis cDNA clone KHRT-09D03 5', mRNA sequence.
EX131043.1:326-347
ACACCGCTTTGACAGATGAGTCCCGCGAGC326TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
RR3EJ62TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD548451.1:304-325
ACACCGCTTTGACTGATGAGTCCCGCGAGC304TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAATCAGA
RS3GQ68TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
FD956948.1:422-443
ACACCGCTTTGACTGATGAGTCCCGCGAGC422TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACGTCGCTCAAATCAGA
RR3GO38TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD980441.1:359-380
ACACCGCTTTGACTGATGAGTCCCGCGAGC359TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAATCAGA
BN18DYSC_UP_021_D07_18FEB2008_057 BN18DYSC Brassica napus cDNA 5', mRNA sequence.
FG554698.1:351-372
ACACCGCTTTAACAGATGAGTCCCGCGAGC351TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACGTCGCTCAAGTCAGA
TSA: Pachycladon cheesemanii 73950_674_4223_5_41.Pachleaf mRNA sequence.
JP990448.1:56-77
ACACCGCATTGACAGATGAGTCCCGCGAGT56TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACAGCGCTGAAATCGGA
TSA: Pachycladon fastigiatum 97996_1064_13058_7_41.Pafaleaf mRNA sequence.
JR034254.1:310-331
ACACCGCATTGACAGATGAGTCCCGCGAGT310TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACAGCGCTGAAATCGGA
TSA: Raphanus sativus RS12937 mRNA sequence.
JT797484.1:313-334
ACACCGCTTTGACAGACGAGTCCCGCGAGC313TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACGTCGCTCAAATCAGA
BONAF55TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONAF55, genomic survey sequence.
BZ466508.1:621-642
GATTTGTATAACCAAGGTTTTTTCTGTAGT621TGACACAGGAGAAAAACGACCTGAGAGAAGAGAAGATATCACTGAAGTCAGA
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress).
BX823592.1:419-440
ACACCGCATTGACAGATGAGTCCCGCGAGT419TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPN9.
AB025631.1:37921-37942
TACTTGTATAACAACGGTTCTTTCTGTAGT37921TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana clone bHLH121 putative bHLH transcription factor mRNA, partial sequence.
AF488633.1:402-423
ACACCGCATTGACAGATGAGTCCCGCGAGT402TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana AT3G19860 mRNA, complete cds, clone: RAFL25-09-J11.
AK317507.1:396-417
ACACCGCATTGACAGATGAGTCCCGCGAGT396TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Thellungiella halophila mRNA, complete cds, clone: RTFL01-09-A12.
AK352927.1:337-358
ACACGGCGTTGACAGATGAGTCCCGCGAGT337TGACACAGGAGAAAAACGACCTACGAGAAGAGAAAACATCGCTGAAGTCGGA
Arabidopsis thaliana unknown protein (At3g19860; MPN9.10) mRNA, complete cds.
AY065107.1:431-452
ACACCGCATTGACAGATGAGTCCCGCGAGT431TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana unknown protein (At3g19860) mRNA, complete cds.
AY081703.1:227-248
ACACCGCATTGACAGATGAGTCCCGCGAGT227TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana chromosome 3.
CP002686.1:6905146-6905167
TACTTGTATAACAACGGTTCTTTCTGTAGT6905146TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana ecotype 9470 chromosome 3 sequence.
CP086731.1:6949465-6949486
TACTTGTATAACAACGGTTCTTTCTGTAGT6949465TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana ecotype 6024 chromosome 3 sequence.
CP086741.1:6962801-6962822
TACTTGTATAACAACGGTTCTTTCTGTAGT6962801TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana ecotype 6021 chromosome 3 sequence.
CP086746.1:6990920-6990941
TACTTGTATAACAACGGTTCTTTCTGTAGT6990920TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana ecotype 5856 chromosome 3 sequence.
CP086751.1:6925727-6925748
TACTTGTATAACAACGGTTCTTTCTGTAGT6925727TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana ecotype 1254 chromosome 3 sequence.
CP086756.1:6946841-6946862
TACTTGTATAACAACGGTTCTTTCTGTAGT6946841TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana chromosome 3.
CP087128.1:6910837-6910858
TACTTGTATAACAACGGTTCTTTCTGTAGT6910837TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Camelina hispida cultivar hispida voucher DAO 902780 chromosome 3.
CP094633.1:12819164-12819185
TTGTATAACAACGTTTTTTTTTTTTGTAGT12819164TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACAGCGCTGAAATCAGA
Arabidopsis thaliana isolate t2t_salk_col chromosome 3.
CP096026.1:6911204-6911225
TACTTGTATAACAACGGTTCTTTCTGTAGT6911204TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana chromosome 3.
CP116282.1:6910839-6910860
TACTTGTATAACAACGGTTCTTTCTGTAGT6910839TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Brassica napus cultivar Xiang5A chromosome 13.
CP123888.1:11194696-11194717
TTGTATAACAACAATGGTTCTTTATGTAGC11194696TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Camelina sativa cultivar CO46 chromosome 1.
CP131539.1:8610778-8610799
TACTTGTATAACAACGTTTCTTTTTGTAGT8610778TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACAGCGCTGAAATCAGA
Capsella bursa-pastoris isolate WGS_leaf chromosome 3.
CP144185.1:6670157-6670178
TACTTTTATAACAACGGTTCTTTTTGTAGT6670157TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACAGTGCTGAAATCAGA
Capsella bursa-pastoris isolate WGS_leaf chromosome 11.
CP144193.1:6829292-6829313
TACTTTTATAACAACGGTTCGTTCTGTAGT6829292TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACAGTGCTGAAATCAGA
Brassica napus genome assembly, chromosome: C01.
HG994365.1:40961146-40961167
TGCTTGTATAACAATGGTTCTTTCTGTAGC40961146TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
LR215054.1:7046853-7046874
TACTTGTATAACAACGGTTCTTTCTGTAGT7046853TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
LR699752.1:6937577-6937598
TACTTGTATAACAACGGTTCTTTCTGTAGT6937577TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
LR699762.1:6907149-6907170
TACTTGTATAACAACGGTTCTTTCTGTAGT6907149TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
LR699767.1:6940400-6940421
TACTTGTATAACAACGGTTCTTTCTGTAGT6940400TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
LR699772.1:6968109-6968130
TACTTGTATAACAACGGTTCTTTCTGTAGT6968109TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Brassica rapa BrabHLH214 gene for Unknown.
LR756751.1:1325-1346
ACACCGCTTTGACAGATGAGTCCCGCGAGC1325TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Brassica oleracea BolbHLH184 gene for Unknown.
LR756972.1:227-248
ACACCGCTTTGACAGATGAGTCTCGCGAGC227TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Brassica napus BnabHLH138 gene for Unknown.
LR757194.1:479-500
ACACCGCTTTGACAGATGAGTCTCGCGAGC479TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Brassica napus BnabHLH188 gene for Unknown.
LR757244.1:380-401
ACACCGCTTTGACAGATGAGTCCCGCGAGC380TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Brassica rapa BrabHLH214 gene for Unknown.
LR757710.1:1325-1346
ACACCGCTTTGACAGATGAGTCCCGCGAGC1325TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Brassica oleracea BolbHLH184 gene for Unknown.
LR758195.1:227-248
ACACCGCTTTGACAGATGAGTCTCGCGAGC227TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Brassica napus BnabHLH138 gene for Unknown.
LR758417.1:479-500
ACACCGCTTTGACAGATGAGTCTCGCGAGC479TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Brassica napus BnabHLH188 gene for Unknown.
LR758467.1:380-401
ACACCGCTTTGACAGATGAGTCCCGCGAGC380TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Brassica rapa BrabHLH214 gene for Unknown.
LR758933.1:1325-1346
ACACCGCTTTGACAGATGAGTCCCGCGAGC1325TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTCAAGTCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
LR881468.1:7099764-7099785
TACTTGTATAACAACGGTTCTTTCTGTAGT7099764TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis arenosa genome assembly, chromosome: 3.
LR999453.1:8082858-8082879
AACTCAGACGGGCTATGTAATTTCTGTAGT8082858TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OW119598.1:6945459-6945480
TACTTGTATAACAACGGTTCTTTCTGTAGT6945459TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291431.1:6926104-6926125
TACTTGTATAACAACGGTTCTTTCTGTAGT6926104TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291438.1:6946839-6946860
TACTTGTATAACAACGGTTCTTTCTGTAGT6946839TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291452.1:6901380-6901401
TACTTGTATAACAACGGTTCTTTCTGTAGT6901380TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291457.1:7050275-7050296
TACTTGTATAACAACGGTTCTTTCTGTAGT7050275TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291462.1:6950382-6950403
TACTTGTATAACAACGGTTCTTTCTGTAGT6950382TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291467.1:7152867-7152888
TACTTGTATAACAACGGTTCTTTCTGTAGT7152867TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291483.1:7045029-7045050
TACTTGTATAACAACGGTTCTTTCTGTAGT7045029TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291488.1:6967850-6967871
TACTTGTATAACAACGGTTCTTTCTGTAGT6967850TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291515.1:6933272-6933293
TACTTGTATAACAACGGTTCTTTCTGTAGT6933272TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291520.1:7037332-7037353
TACTTGTATAACAACGGTTCTTTCTGTAGT7037332TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291525.1:6915292-6915313
TACTTGTATAACAACGGTTCTTTCTGTAGT6915292TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291568.1:6948785-6948806
TACTTGTATAACAACGGTTCTTTCTGTAGT6948785TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291573.1:7349143-7349164
TACTTGTATAACAACGGTTCTTTCTGTAGT7349143TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291578.1:7101690-7101711
TACTTGTATAACAACGGTTCTTTCTGTAGT7101690TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291583.1:6872958-6872979
TACTTGTATAACAACGGTTCTTTCTGTAGT6872958TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291592.1:6932714-6932735
TACTTGTATAACAACGGTTCTTTCTGTAGT6932714TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291597.1:7018955-7018976
TACTTGTATAACAACGGATCTTTCTGTAGT7018955TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291602.1:6967430-6967451
TACTTGTATAACAACGGTTCTTTCTGTAGT6967430TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291607.1:6928679-6928700
TACTTGTATAACAACGGTTCTTTCTGTAGT6928679TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291619.1:6990195-6990216
TACTTGTATAACAACGGTTCTTTCTGTAGT6990195TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291624.1:6926882-6926903
TACTTGTATAACAACGGTTCTTTCTGTAGT6926882TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291629.1:6967555-6967576
TACTTGTATAACAACGGTTCTTTCTGTAGT6967555TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291651.1:6901045-6901066
TACTTGTATAACAACGGTTCTTTCTGTAGT6901045TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291656.1:7042018-7042039
TACTTGTATAACAACGGTTCTTTCTGTAGT7042018TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291668.1:6961389-6961410
TACTTGTATAACAACGGTTCTTTCTGTAGT6961389TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291673.1:7002066-7002087
TACTTGTATAACAACGGTTCTTTCTGTAGT7002066TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291679.1:6928740-6928761
TACTTGTATAACAACGGTTCTTTCTGTAGT6928740TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291684.1:7056547-7056568
TACTTGTATAACAACGGTTCTTTCTGTAGT7056547TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291697.1:7088500-7088521
TACTTGTATAACAACGGTTCTTTCTGTAGT7088500TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291702.1:6922559-6922580
TACTTGTATAACAACGGTTCTTTCTGTAGT6922559TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291711.1:7041534-7041555
TACTTGTATAACAACGGTTCTTTCTGTAGT7041534TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291716.1:7057813-7057834
TACTTGTATAACAACGGTTCTTTCTGTAGT7057813TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291721.1:6948926-6948947
TACTTGTATAACAACGGTTCTTTCTGTAGT6948926TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX291732.1:6938499-6938520
TACTTGTATAACAACGGTTCTTTCTGTAGT6938499TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461137.1:6930006-6930027
TACTTGTATAACAACGGTTCTTTCTGTAGT6930006TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461142.1:6930295-6930316
TACTTGTATAACAACGGTTCTTTCTGTAGT6930295TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461147.1:6904273-6904294
TACTTATATAACAACGGTTCTTTCTGTAGT6904273TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461152.1:6971862-6971883
TACTTGTATAACAACGGTTCTTTCTGTAGT6971862TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461157.1:6902528-6902549
TACTTGTATAACAACGGTTCTTTCTGTAGT6902528TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461167.1:6964748-6964769
TACTTGTATAACAACGGTTCTTTCTGTAGT6964748TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461172.1:6907976-6907997
TACTTGTATAACAACGGTTCTTTCTGTAGT6907976TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461177.1:6983424-6983445
TACTTGTATAACAACGGTTCTTTCTGTAGT6983424TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461182.1:7018475-7018496
TACTTGTATAACAACGGTTCTTTCTGTAGT7018475TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461187.1:6940689-6940710
TACTTGTATAACAACGGTTCTTTCTGTAGT6940689TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461197.1:7022664-7022685
TACTTGTATAACAACGGTTCTTTCTGTAGT7022664TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461202.1:7208112-7208133
TACTTGTATAACAACGGTTCTTTCTGTAGT7208112TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461207.1:6910937-6910958
TACTTGTATAACAACGGTTCTTTCTGTAGT6910937TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACATCGCTGAAATCAGA
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:5735784-5735805
CTTGTATAACAATATGCTTCTTTCTGTAGC5735784TGACACAGGAGAAAAACGACCTGAGAGAAGAAAAGACGTCGCTCAAATCAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGGTCGTTTTTCTCCTGTGTCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGTCGTTTTTCTCCTGTGTCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.504 | 0.496 | search_plus_done; http://172.18.8.135:50400/match?q=AGGTCGTTTTTCTCCTGTGTCA&k=0&no_gap=0&offset=0&limit=50
3.687 | 3.183 | search_minus_done; http://172.18.8.135:50400/match?q=TGACACAGGAGAAAAACGACCT&k=0&no_gap=0&offset=0&limit=35
3.783 | 0.096 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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