GGGenome | Results

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2025-04-06 16:56:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Micromys minutus genome assembly, chromosome: 2.
OZ004782.1:93490887-93490906

TTAGGTGTTCAAGGAAAGCATGGCATAGAA93490887AGGTGAGAGTCAAGGAATCCAGATCACCTACCACACCACAACCTTTCCAG

Meles meles genome assembly, chromosome: 15.
OV277456.1:16420607-16420626

TTAATGTACTTGGTTGGTTGAGCTGTCTTG16420607AGGTGAGAGTCAAGGAATCCTGGAGTGATAGTGTCTCTCTCGTGAGGGTG

Spisula subtruncata genome assembly, chromosome: 3.
OY787662.1:52024157-52024176

CTTCCTTTCGTTATTCCATTTTAGAGACAG52024157AGGTGAGAGTCAAGGAATCCGGGTGCGATACCCAAGCTCGTTTCGAATAG

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:150707784-150707803

GTGGAGGGAGTTTGCCATCAATGTTGATTC150707784GGATTCCTTGACTCTCACCTTTATTCCTTCAAACAATTCAATTGCGTTTG

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:156209556-156209575

GTGGAGGGAGTTTGCCATCAATGTTGATTC156209556GGATTCCTTGACTCTCACCTTTATTCCTTCAAACAATTCAATTGCGTTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=AGGTGAGAGTCAAGGAATCC&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=GGATTCCTTGACTCTCACCT&k=0&no_gap=0&offset=0&limit=47
0.138 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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