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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:47:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Solanum melongena mRNA, clone: CHX03I10, 5'end, expressed in ovary at 24h after anthesis.
FS013059.1:133-151
CAAGTGCAAGCTCTGTTCCAAACACAAAGG133AGGTGCACCGATTCTTTCCTCCTGGAAAAATAATGCATATAGTTACTCT
Secale cereale genome assembly, chromosome: 4R.
LR738712.1:766818011-766818029
TCTCATTTGCAGAAGCAATCTTACCTCTGA766818011AGGTGCACCGATTCTTTCCTCCTGCCAAATCTCCCGTCAAATCAGGATG
Aegilops longissima genome assembly, chromosome: 7S.
LR881075.1:582122503-582122521
TCTCATTTGCAGAAGCAATCTTACCTCTGA582122503AGGTGCACCGATTCTTTCCTGCCAAATCTCCCATAAAATCAGGACGGTC
Bacillus sp. KH172YL63 DNA, complete genome.
AP022842.1:1085938-1085956
CCTTGGATTATTCGTATTGTTAGTCGGTGT1085938AGGTGCACCGATTCTTTCCGGTGGAAGAGGAGGGTTTCCGATCCTGATC
Ectemnius continuus genome assembly, chromosome: 1.
OU342856.1:15873106-15873124
ACTGGCGAAGATTAGGGCATCGATTTAAGA15873106AGGTGCACCGATTCTTTCCTCAAGACATCTGACTTTTAAATGCTTTTAA
Aegilops sharonensis genome assembly, chromosome: 7S.
LR880972.1:818129276-818129294
GACCGTCCTGATTTTATGGGAGATTTGGCA818129276GGAAAGAATCGGTGCACCTTCAGAGGTAAGATTGCTTCTGCAAATGAGA
Aegilops longissima genome assembly, chromosome: 7S.
LR881075.1:771198222-771198240
GACCGTCCTGATTTTATGGGAGATTTGGCA771198222GGAAAGAATCGGTGCACCTTCAGAGGTAAGATTGCTTCTGCAAATGAGA
Ectemnius lituratus genome assembly, chromosome: 2.
OU343034.1:20545524-20545542
TTAAAAGCATTTAAAAGTCAGATGTCTTGA20545524GGAAAGAATCGGTGCACCTTCTTAAATCGATGCCCTAATCTTCGCGAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGTGCACCGATTCTTTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGTGCACCGATTCTTTCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.313 | 0.304 | search_plus_done; http://172.18.8.135:50400/match?q=AGGTGCACCGATTCTTTCC&k=0&no_gap=0&offset=0&limit=50
0.422 | 0.110 | search_minus_done; http://172.18.8.135:50400/match?q=GGAAAGAATCGGTGCACCT&k=0&no_gap=0&offset=0&limit=45
0.425 | 0.002 | cgi_end;

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