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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:39:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-29023 Leaf Coffea canephora cDNA clone cccl1b13 5', mRNA sequence.
DV687125.1:291-312
ATCATCATCATCAAGCAATGTACCTGCACC291ATTCTGGGATAGTTGGGCACCTCAAAAGGGCTCTCAAGCTCCTTCCCTCAGC
CGN-31272 Leaf Coffea canephora cDNA clone cccl18j22 5', mRNA sequence.
DV688550.1:322-343
ATCATCATCATCAAGCAATGTACCTGCACC322ATTCTGGGATAGTTGGGCACCTCAAAAGGGCTCTCAAGCTCCTTCCCTCAGC
CGN-34032 Leaf Coffea canephora cDNA clone cccl24e2 5', mRNA sequence.
DV690587.1:269-290
ATCATCATCATCAAGCAATGTTCCTGCACC269ATTCTGGGATAGTTGGGCACCTCAAAAGGGCTCTCAAGCTCCTTCCCTCAGC
CA00-XX-LV8-088-H01-CB.F Coffea arabica LV8 Coffea arabica cDNA clone CA00-XX-LV8-088-H01-CB, mRNA sequence.
GT698672.1:299-320
ATCATCATCATCAAGCAATGTACCTGCACC299ATTCTGGGATAGTTGGGCACCTCAAAAGGGCTCTCAAGCTCCTTCCCTCAGC
CA00-XX-FR2-082-E04-AC.F Coffea arabica FR2 Coffea arabica cDNA clone CA00-XX-FR2-082-E04-AC, mRNA sequence.
GT704542.1:118-139
ATCATCATCATCAAGCAATGTACCTGCACC118ATTCTGGGATAGTTGGGCACCTCAAAAGGGCTCTCAAGCTCCTTCCCTCAGC
CA00-XX-LV9-036-E11-BM.F Coffea arabica LV9 Coffea arabica cDNA clone CA00-XX-LV9-036-E11-BM, mRNA sequence.
GT711095.1:298-319
ATCATCATCATCAAGCAATGTACCTGCACC298ATTCTGGGATAGTTGGGCACCTCAAAAGGGCTCTCAAGCTCCTTCCCTCAGC
CA00-XX-EA1-024-E02-EC.F Coffea arabica EA1 Coffea arabica cDNA clone CA00-XX-EA1-024-E02-EC, mRNA sequence.
GT725700.1:329-350
ATCATCATCATCAAGCAATGTACCTGCACC329ATTCTGGGATAGTTGGGCACCTCAAAAGGGCTCTCAAGCTCCTTCCCTCAGC
CA00-XX-RT8-013-D05-JF.F Coffea arabica RT8 Coffea arabica cDNA clone CA00-XX-RT8-013-D05-JF, mRNA sequence.
GT727519.1:316-337
ATCATCATCATCAAGCAATGTACCTGCACC316ATTCTGGGATAGTTGGGCACCTCAAAAGGGCTCTCAAGCTCCTTCCCTCAGC
CA00-XX-LV8-068-B09-AG.F Coffea arabica LV8 Coffea arabica cDNA clone CA00-XX-LV8-068-B09-AG, mRNA sequence.
GW472354.1:297-318
ATCATCATCATCAAGCAATGTACCTGCACC297ATTCTGGGATAGTTGGGCACCTCAAAAGGGCACTCAAGCTCCTTCCCTCAGC
CA00-XX-LV8-046-A08-BM.F Coffea arabica LV8 Coffea arabica cDNA clone CA00-XX-LV8-046-A08-BM, mRNA sequence.
GW477974.1:294-315
ATCATCATCATCAAGCAATGTACCTGCACC294ATTCTGGGATAGTTGGGCACCTCAAAAGGGCACTCAAGCTCCTTCCCTCAGC
CA00-XX-LV9-024-G11-CB.F Coffea arabica LV9 Coffea arabica cDNA clone CA00-XX-LV9-024-G11-CB, mRNA sequence.
GW486400.1:245-266
ATCATCATCATCAAGCAATGTACCTGCACC245ATTCTGGGATAGTTGGGCACCTCAAAAGGGCACTCAAGCTCCTTCCCTCAGC
CCES77 Coffee EST-SSR sequence Coffea canephora STS cDNA, sequence tagged site.
GF110717.1:322-343
ATCATCATCATCAAGCAATGTACCTGCACC322ATTCTGGGATAGTTGGGCACCTCAAAAGGGCTCTCAAGCTCCTTCCCTCAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGTGCCCAACTATCCCAGAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGTGCCCAACTATCCCAGAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.165 | 0.156 | search_plus_done; http://172.18.8.135:50400/match?q=AGGTGCCCAACTATCCCAGAAT&k=0&no_gap=0&offset=0&limit=50
1.171 | 1.006 | search_minus_done; http://172.18.8.135:50400/match?q=ATTCTGGGATAGTTGGGCACCT&k=0&no_gap=0&offset=0&limit=50
1.179 | 0.008 | cgi_end;

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