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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:13:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141981.1:23773310-23773329
AGGAGAAAGAGAAAAAGGAAGGAGGAAATG23773310AGGTTGCTACCGACCCTACCCGAGAGGAAAGGCCGGCAACTGAAGGTATA
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143369.1:23469590-23469609
AGGAGAAAGAGAAAAAGGAAGGAGGAGATG23469590AGGTTGCTACCGACCCTACCCGAGAGGAAAGGCCGGCAACTGAAGGTATA
Malus domestica genome assembly, chromosome: 12.
OU696688.1:23131847-23131866
AGGAGAAAGAGAAAAAGGAAGGAGGAGATG23131847AGGTTGCTACCGACCCTACCCGAGAGGAAAGGCCGGCAACTGAAGGTATA
Malus domestica genome assembly, chromosome: 12.
OU745002.1:22759761-22759780
AGGAGAAAGAGAAAAAGGAAGGAGGAGATG22759761AGGTTGCTACCGACCCTACCCGAGAGGAAAGGCCGGCAACTGAAGGTATA
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:8996617-8996636
TATACCTTCAGTTGCCGGCCTTTCCTCTCG8996617GGTAGGGTCGGTAGCAACCTCATCTCCTCCTTCCTTTTTCTCTTTCTCCT
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:8638438-8638457
TATACCTTCAGTTGCCGGCCTTTCCTCTCG8638438GGTAGGGTCGGTAGCAACCTCATTTCCTCCTTCCTTTTTCTCTTTCTCCT
Malus baccata partial hdg11 gene for putative homeobox-leucine zipper protein HDG11-like, exons 1-2.
LM999991.1:555-574
TATACCTTCAGTTGCCGGCCTTTCCTCTCG555GGTAGGGTCGGTAGCAACCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGGTTGCTACCGACCCTACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGTTGCTACCGACCCTACC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.232 | 0.223 | search_plus_done; http://172.18.8.135:50400/match?q=AGGTTGCTACCGACCCTACC&k=0&no_gap=0&offset=0&limit=50
0.320 | 0.087 | search_minus_done; http://172.18.8.135:50400/match?q=GGTAGGGTCGGTAGCAACCT&k=0&no_gap=0&offset=0&limit=46
0.322 | 0.002 | cgi_end;

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