GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:38:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Onychomys torridus genome assembly, chromosome: 8.
LR877195.1:13920412-13920432
TCACAGAAGCATTTGGCTGGCTCTCTCCCA13920412AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Onychomys arenicola genome assembly, chromosome: 8.
OX460354.1:8856055-8856075
TCACAGAAGCATTTGGCTGGCTCTCTCCCA8856055AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Onychomys leucogaster genome assembly, chromosome: 8.
OX460378.1:8617650-8617670
TCACAGAAGCATTTGGCTGGCTCTCTCCCA8617650AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Onychomys leucogaster genome assembly, chromosome: 8.
OX460425.1:8613607-8613627
TCACAGAAGCATTTGGCTGGCTCTCTCCCA8613607AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Onychomys arenicola genome assembly, chromosome: 8.
OX460449.1:8684576-8684596
TCACAGAAGCATTTGGCTGGCTCTCTCCCA8684576AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Onychomys torridus genome assembly, chromosome: 8.
OX460889.1:13920412-13920432
TCACAGAAGCATTTGGCTGGCTCTCTCCCA13920412AGGTTTTAGTAGCAAGGCTTCAATTCCAGCTTTGTACACAAGAGTGAGCCA
Brassica napus cultivar Xiang5A chromosome 14.
CP123889.1:16120680-16120700
TCTGCTCGGTTCTGTATAAGGTGATTTCAA16120680AGGTTTTAGTAGCAAGGCTTCAACCGTTCCTCTCTCAGATTGTTTCTGTTA
Brassica napus genome assembly, chromosome: A04.
HG994358.1:10640256-10640276
TCTGCTCGGTTCTGTATAAGGTGATTTCAA10640256AGGTTTTAGTAGCAAGGCTTCAACCGTTCCTCTCTCAGATTGTTTCTGTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGGTTTTAGTAGCAAGGCTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGGTTTTAGTAGCAAGGCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.111 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=AGGTTTTAGTAGCAAGGCTTC&k=0&no_gap=0&offset=0&limit=50
0.131 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGCCTTGCTACTAAAACCT&k=0&no_gap=0&offset=0&limit=42
0.131 | 0.000 | cgi_end;

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