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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-24 15:52:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pv023A_M13R_A08.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE698034.1:500-519
TAAGCACTGGCTGCAAGAGAAGAGAGTGAA500AGTAATCCAGGCGGTGATTGAATAGCAGATGGTGGATCAGATTGGATTAA
Sphenostylis stenocarpa genome assembly, chromosome: 4.
OY731401.1:71969573-71969592
TAAGCACTGGCTGCAAGAGAAGAGAGTGAA71969573AGTAATCCAGGCGGTGATTGAATAGCAGATGGAGGATCAGATTGGATTAA
Sequence 107099 from patent US 9029636.
HL016163.1:358-377
TTTCTTCAATCTGATCCACCATCTGGTATT358CAATCACCGCCTGGATTACTTTCACTCTCTGCTCTTGCGGCCAATGCTTA
se71d03.y1 Gm-c1023 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1023-126 5' similar to TR:O65600 O65600 HYPOTHETICAL 45.4 KD PROTEIN, mRNA sequence.
AW164351.1:206-225
TTTCTTCAATCTGATCCACCATCTGGTATT206CAATCACCGCCTGGATTACTTTCACTCTCTGCTCTTGCGGCCAATGCTTA
UCRVU05_CCNN5050_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN5050.b1, mRNA sequence.
FG842231.1:535-554
TTAATCCAATCTGATCCACCATCTGCTATT535CAATCACCGCCTGGATTACTTTCACTCTCTTCTCTTGCGGCCAATGCTTA
Vigna angularis mRNA, clone: VES03J18.
HX943446.1:547-566
TTAATCCAATCTGATCCCCCATCTGCTATT547CAATCACCGCCTGGATTACTTTCACTCTCTTCTCTTGCGGCCAATGCTTA
Vigna angularis mRNA, clone: VES04E24.
HX943705.1:439-458
TTAATCCAATCTGATCCCCCATCTGCTATT439CAATCACCGCCTGGATTACTTTCACTCTCTTCTCTTGCGGCCAATGCTTA
Vigna angularis mRNA, clone: VES11C05.
HX946286.1:696-715
TTAATCCAATCTGATCCCCCATCTGCTATT696CAATCACCGCCTGGATTACTTTCACTCTCTTCTCTTGCGGCCAATGCTTA
Vigna angularis mRNA, clone: VES16L22.
HX948402.1:47-66
TTAATCCAATCTGATCCCCCATCTGCTATT47CAATCACCGCCTGGATTACTTTCACTCTCTTCTCTTGCGGCCAATGCTTA
Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
AP015044.1:29456346-29456365
TTAATCCAATCTGATCCCCCATCTGCTATT29456346CAATCACCGCCTGGATTACTTTCACTCTCTTCTCTTGCGGCCAATGCTTA
Vigna unguiculata cultivar Xiabao 2 chromosome Vu04.
CP039349.1:48949261-48949280
TTAATCCAATCTGATCCACCATCTGCTATT48949261CAATCACCGCCTGGATTACTTTCACTCTCTTCTCTTGCGGCCAATGCTTA
Glycine max cultivar Williams 82 chromosome 9.
CP126434.1:34921262-34921281
TTTCTTCAATCTGATCCACCATCTGGTATT34921262CAATCACCGCCTGGATTACTTTCACTCTCTGCTCTTGCGGCCAATGCTTA
Petrimonas mucosa isolate ING2-E5A genome assembly, chromosome: I.
LT608328.1:3026103-3026122
TAACTACACTCTGCAGGGCGGCGTTCAACT3026103CAATCACCGCCTGGATTACTTTATAGGTGGAACAAACGTTTTGACCGCAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTAATCCAGGCGGTGATTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTAATCCAGGCGGTGATTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.417 | 0.409 | search_plus_done; http://172.18.8.135:50400/match?q=AGTAATCCAGGCGGTGATTG&k=0&no_gap=0&offset=0&limit=50
1.167 | 0.750 | search_minus_done; http://172.18.8.135:50400/match?q=CAATCACCGCCTGGATTACT&k=0&no_gap=0&offset=0&limit=48
1.174 | 0.007 | cgi_end;

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