GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 06:10:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

pOP-EO02202_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02202 5', mRNA sequence.
EY409333.1:180-203
AGAGCCTCTATAGGGAGTTCACATGGTGCG180AGTACAAGAGCTTCGCCCATGGAACAAGGCTGACTGATAACAGGCTGGGGCAGT
pOP-EO03767_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO03767 5', mRNA sequence.
EY413643.1:154-177
AGAGCCTCTATAGGGAGTTCACATGGTGCG154AGTACAAGAGCTTCGCCCATGGAACAAGGCTGACTGATAACAGGCTGGGGCAGT
TSA: Elaeis guineensis EgEfMPOB00116 GA 2-oxidase 2 mRNA, complete cds, mRNA sequence.
EU284931.1:926-949
AGAGCCTCTATAGGGAGTTCACATGGTGCG926AGTACAAGAGCTTCGCCCATGGAACAAGGCTGACTGATAACAGGCTGGGGCAGT
Elaeis guineensis clone estEgSNP24 gibberellin 2-beta-dioxygenase (GA2ox) mRNA, complete cds.
JX438714.1:1742-1765
AGAGCCTCTATAGGGAGTTCACATGGTGCG1742AGTACAAGAGCTTCGCCCATGGAACAAGGCTGACTGATAACAGGCTGGGGCAGT
Elaeis guineensis EST, clone (6lib)_isotig01932.
LM617665.1:872-895
ACTGCCCCAGCCTGTTATCAGTCAGCCTTG872TTCCATGGGCGAAGCTCTTGTACTCGCACCATGTGAACTCCCTATAGAGGCTCT
TSA: Elaeis guineensis isotig05994.Elguifruit mRNA sequence.
JO093246.1:359-382
ACTGCCCCAGCCTGTTATCAGTCAGCCTTG359TTCCATGGGCGAAGCTCTTGTACTCGCACCATGTGAACTCCCTATAGAGGCTCT
TSA: Elaeis guineensis isotig05995.Elguifruit mRNA sequence.
JO093247.1:350-373
ACTGCCCCAGCCTGTTATCAGTCAGCCTTG350TTCCATGGGCGAAGCTCTTGTACTCGCACCATGTGAACTCCCTATAGAGGCTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGTACAAGAGCTTCGCCCATGGAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTACAAGAGCTTCGCCCATGGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.237 | 0.229 | search_plus_done; http://172.18.8.135:50400/match?q=AGTACAAGAGCTTCGCCCATGGAA&k=0&no_gap=0&offset=0&limit=50
0.388 | 0.150 | search_minus_done; http://172.18.8.135:50400/match?q=TTCCATGGGCGAAGCTCTTGTACT&k=0&no_gap=0&offset=0&limit=46
0.390 | 0.002 | cgi_end;

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