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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-12 03:52:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:2581915-2581934
GTTCAGATTCTAAATCTGCCACTACTGACG2581915AGTAGAGAATCGGCCGTGTGATAGACTTACTTTGTGAAACAATAGTTTAT
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:2895928-2895947
GTTCATATTCTAAATCCGCCACTACTTACG2895928AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:3120240-3120259
GTTCATATTCTAAATCCGCTACTACTGACG3120240AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus domestica genome assembly, chromosome: 2.
OU744543.1:3241450-3241469
GTTCATATTCTAAATCCGCTACTACTGACG3241450AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus domestica genome assembly, chromosome: 2.
OU744954.1:3289271-3289290
GTTCATATTCTAAATCCGCTACTACTGACG3289271AGTAGAGAATCGGCCGTGTGATAGGCTTACTTTGTGAAACAATAGTTTAT
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:32976682-32976701
ATAAACTATTGTTTCACAAAGTAAGCCTAT32976682CACACGGCCGATTCTCTACTCGTCAGTAGTGGTGGATTTAGAATCTGAAC
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:35593988-35594007
ATAAACTATTGTTTCACAAAGTAAGCCTAT35593988CACACGGCCGATTCTCTACTCGTCATCAGTAGTAGCGGATTTAGAATATG
Malus x domestica clone Florina BAC 36I17, complete sequence.
GU295057.1:69700-69719
ATAAACTATTGTTTCACAAAGTAAGCCTAT69700CACACGGCCGATTCTCTACTCGTCAGTAGTAGCGGATTTAGAATATGAAC
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:33934488-33934507
ATAAACTATTGTTTCACAAAGTAAGCCTAT33934488CACACGGCCGATTCTCTACTCGTCGGTAGTAGCGGATATAGAATATGAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTAGAGAATCGGCCGTGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTAGAGAATCGGCCGTGTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.373 | 0.364 | search_plus_done; http://172.18.8.135:50400/match?q=AGTAGAGAATCGGCCGTGTG&k=0&no_gap=0&offset=0&limit=50
0.476 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=CACACGGCCGATTCTCTACT&k=0&no_gap=0&offset=0&limit=45
0.479 | 0.003 | cgi_end;

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